Amphimedon queenslandica (sponge): 100640358
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Entry
100640358 CDS
T02284
Name
(RefSeq) general transcription factor IIF subunit 1-like
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
aqu
Amphimedon queenslandica (sponge)
Pathway
aqu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
aqu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100640358
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aqu03021
]
100640358
Transcription machinery [BR:
aqu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
100640358
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
100640358
NCBI-ProteinID:
XP_003384721
UniProt:
A0A1X7VEJ8
LinkDB
All DBs
Position
Unknown
AA seq
462 aa
AA seq
DB search
MATQEYSVKLGNPDNKEYNIMRFKPPHNCDLQQLTNPKLDRQETKEQDEGKVERVLEGEG
TEYRQKEREDAKRRRRGFRARKANPADQPWILREHKKGGKHFIGRKEGGINSSASYYLLS
LGANNSFEAYPISNWYNFVPPVKYNYLNDEEAEERFEKRHKTLNYFSIMMSKRIKEKTED
ETDPLTVTSKAAKDSDSEAEFSSVGSDTDDKPKSSSKGKKGKKGDSKKKRKASAAVKNDD
SEAGEETDEGDMESQEMDYYSTTSSDGEEERLLKEVKEQPRDDAEVERKEEGGIDEVFGD
KSSSSSDEGEDLTESGKELKAIIRKQEPVKEEEEEELESEEESKESNQKTSSPSKGSAGS
TKRVLESPSVEGPSKKKIRKEEEEKQPIRPDRITTHEVYKYLSRKPMTSKALMKKFIKLK
PEMDKDSITGALAAILNSSMSLIETQVVDKKKRYSIRSKGDS
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggccactcaagaatattcagtcaaacttggaaatccagacaacaaagagtataatata
atgagattcaagccaccacacaattgtgaccttcagcaactcactaatcccaagttggat
cgccaagagacaaaggaacaggacgagggaaaggttgagcgagtccttgaaggagaggga
acagagtacaggcagaaggagagagaggacgccaagagaaggaggcgtggctttcgtgct
aggaaagccaacccagctgatcagccatggatactcagagaacacaagaaaggaggaaaa
cattttataggacgtaaggaaggtgggattaacagcagtgcctcttattacctcctgtct
cttggagccaataactcatttgaagcttatcccatttcaaactggtataactttgtacct
cctgtcaaatataattatttgaatgacgaggaggcagaagagagatttgagaagagacac
aagacactcaattatttctcgattatgatgagcaagaggatcaaggagaagacagaagat
gaaactgacccactgacagtcacatcaaaagctgccaaggactctgattcagaggctgag
ttttcatcagttgggagtgacactgatgataaacccaaatcttccagtaaaggaaagaaa
ggcaagaaaggagattctaagaagaaaaggaaagcctcagcagctgttaagaatgatgac
agcgaggcaggagaagagactgatgaaggtgacatggaatcacaagaaatggattattat
tcaaccaccagctctgatggagaagaggaaagacttctcaaagaggtgaaggagcagcca
agagatgatgctgaagttgagaggaaggaggaaggagggattgatgaagtgtttggggat
aaaagctcatcttcatctgatgaaggagaggacctaactgaaagtggaaaagagttgaag
gcaattatacgcaagcaagaaccagtcaaagaagaagaagaagaagaattggagtctgaa
gaagaaagcaaagaatccaatcagaaaacttcaagtccgtcaaaagggagtgctggtagt
acaaagagagtgttggagtctccatcagtggaaggaccatcaaagaagaagatcaggaaa
gaggaggaggagaaacagcccataagaccagataggatcaccactcatgaggtgtacaag
tatttatcaaggaagccaatgacttctaaagcattgatgaagaaattcataaagttaaag
ccagaaatggataaagactccattacaggagctcttgctgctatacttaactcatcaatg
tcactgatagagacacaagtggttgataagaagaagagatattccattcgctctaaagga
gactcatag
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