Amphimedon queenslandica (sponge): 100640489
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Entry
100640489 CDS
T02284
Name
(RefSeq) nuclear RNA export factor 1-like
KO
K14284
nuclear RNA export factor
Organism
aqu
Amphimedon queenslandica (sponge)
Pathway
aqu03008
Ribosome biogenesis in eukaryotes
aqu03013
Nucleocytoplasmic transport
aqu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aqu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100640489
03015 mRNA surveillance pathway
100640489
03008 Ribosome biogenesis in eukaryotes
100640489
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aqu03019
]
100640489
03009 Ribosome biogenesis [BR:
aqu03009
]
100640489
Messenger RNA biogenesis [BR:
aqu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100640489
mRNA cycle factors
Stress granule specific factors
100640489
Ribosome biogenesis [BR:
aqu03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
100640489
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NXF_NTF2
LRR_NXF1-5
LRR_8
LRR_4
LRR_9
Motif
Other DBs
NCBI-GeneID:
100640489
NCBI-ProteinID:
XP_019850571
UniProt:
A0AAN0J1G7
LinkDB
All DBs
Position
Unknown
AA seq
589 aa
AA seq
DB search
MASYRGGQQGGGYNNRGRRGDGGRGRGGGGRGDKRKVSFHSQHDDRWDDGPSSSGNDDYR
SSNRGYRGGRGGRGGGNNDQGRWTRGGGPRGRGRDRGYNDREREDYGNERGGFKSFKGKN
RYTPYDKSPPGVGGMRSSGGVFDRIGPREQRGRGFNRDQSGGPRRDVFGRGRMGSDNRGR
GWRNDRYVETTGERRVYNRTDSDMMEEDSSSILLKVLGQRYDSITMSLNLSDMFHDPTLH
EHKIRSSMFDASFVNTVLDLVATHCPQLVALNLSNNRLQRLQAYSSLRDKCPSIESLDLS
GNELHSPQELEAIAPLPSVKSLILEGNPFRDQEFSSYASVVRKYFPNLELLDGKPLPDPV
KFDLPTNIGTIPPSQKGYLVNEDIRSLVVSFLEQYFSLYDGETRDKLLEAYSDNAVFSLS
VDVSPQQRGPPLQQYMSSSRNLARVNDPGKRSSLIKHGRIDIVQFLRQFPQSCHISSSFS
VDVMKANPMCTGFNVYGLFGEAGRMDSPIIRAFTRTFVIVAAGTGVTQEVVVVFKEIFFL
IGAHVYTGDFGGRLIFMLMAATFSSSSFVVAGVCSVAIKERTSKNPSFF
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgtatagaggaggccagcagggtggcggatacaacaatagagggagaagagga
gacggggggagaggaagaggaggcggtggaaggggagataaaagaaaagtgagctttcac
agccaacatgatgacagatgggatgatggtccttcttcatctggaaacgatgactacagg
agttctaacagaggctacagaggtggaagaggaggacgaggaggaggaaacaatgatcag
ggtcggtggactagaggaggtggaccaagggggcgtggacgagatcgcggatacaatgac
cgagaacgtgaagattacggtaacgaaagaggtggctttaagtcttttaagggaaagaac
agatatactccttatgataaaagcccacctggagttggtggaatgagaagttcgggcgga
gtttttgatagaattgggccgagagagcaaagagggcgtggctttaatcgtgatcagtcg
ggcggtcctagacgtgatgtttttggtagaggacgtatgggcagtgacaacagagggagg
ggctggagaaatgatagatacgttgagacgactggcgaaaggagagtttataatagaacg
gatagtgacatgatggaggaagacagctccagcatattactaaaagtcctaggtcaaaga
tatgattccattaccatgtctctcaatcttagtgacatgtttcatgatcctacattacat
gaacataaaatccgtagctcgatgtttgatgcttcatttgttaatactgttcttgatctt
gttgcaacacattgtcctcaattggttgctcttaatcttagtaacaacagattgcaaagg
cttcaagcttattctagtctaagagacaagtgcccatctatagagtctttagatctttca
ggaaatgaactacacagtcctcaagagctagaggccattgccccattgcctagtgtgaag
tccttaattttagaagggaatcctttcagagatcaagagttcagttcttatgcaagcgtt
gtcaggaagtactttccaaatctagaactgcttgatgggaagccattacctgatcctgtt
aaatttgatctaccaaccaacataggcaccatacctccttctcagaaaggctatctggtc
aatgaagacattagatcacttgtagtctcatttttagaacaatatttttccctctatgat
ggtgaaactcgagataaattattggaggcttatagtgataatgctgtattctctttatct
gttgacgtgtctccacagcaaaggggcccacccttgcagcagtatatgtcatctagccgt
aatttggcgagagtcaatgatcctggcaaacggtcttctttaatcaaacatggccgcatc
gatatagttcagtttttaagacagtttccgcagagctgccatatttctagctcttttagt
gtcgacgtcatgaaagctaatccaatgtgcactggttttaatgtgtacggtctatttgga
gaagctggtaggatggactctcctatcattagagcttttacgagaacttttgttattgtt
gcagctggaacaggtgtgactcaagaagtggtggtagtttttaaagaaatattttttttg
attggagcacatgtatatactggtgattttggaggaagactcatttttatgttaatggca
gcaaccttctcttcttccagcttcgttgttgctggagtttgcagtgtagccattaaagaa
aggacctctaagaatccaagtttcttttga
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