Amphimedon queenslandica (sponge): 100640527
Help
Entry
100640527 CDS
T02284
Name
(RefSeq) RNA-binding protein 39-like isoform X2
KO
K13091
RNA-binding protein 23/39
Organism
aqu
Amphimedon queenslandica (sponge)
Brite
KEGG Orthology (KO) [BR:
aqu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aqu03041
]
100640527
Spliceosome [BR:
aqu03041
]
Common components
Common spliceosomal components
General mRNP proteins
100640527
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_5
RRM_occluded
RRM_7
RRM_8
RSRP
Motif
Other DBs
NCBI-GeneID:
100640527
NCBI-ProteinID:
XP_011409901
UniProt:
A0A1X7VKI4
LinkDB
All DBs
Position
Unknown
AA seq
540 aa
AA seq
DB search
MAADKADDFDVEALLEETYNKVQPLPVPEVDSTNALYSDTNATATTTNNNNDKSPDERSE
KEAGSPPPSDEDDRKKRKKKKRSRSRSRSRSRSHSPRRRSSRRSRSRSRDRDRHKYRRHR
HRSRSRSRSRDRRRHRSRDRDYRDRDYRDRDRDKGRDRDKERDRDRNSPPSVAQPIGSYK
RQRSPDLEPPSVDRDNRTIMCMQLSAKVTNRDLEDFFMRAGVVRDVHIIADRQSRRSKGI
AYVEFQEESSVFTALSFSGQKVHGIPIMIQPTMAEKNRLAAAAENLKKAEGPKKLYVGSL
HYNITEDMLQGIFSPFGNVERVSIMRDTATNVSRGYAFVEFRDSDSAERAMANLNGFELA
GRPMKVNYGTVDTSLVNIDSLDGEDMDVGVGMTPQSRVALMHKLAAGHNADMSIPGVQVP
PPPFAVPTMPTCITSCCFVIGNMFDPSKETGSDWDKEIREDVLEECVKFGNIFHIHVDKF
SQGKVYIKSQTPQTASAAVGSFNGRRYAGNVIHAELVPENTYHLKFPGALAATVPLKPSL
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgataaagctgacgatttcgacgtcgaagctctccttgaggaaacctacaac
aaagtccagcctcttcctgtaccggaggtggacagcaccaatgctctatactctgatacc
aatgccactgctactactactaataataataatgataaatctcctgacgaaagaagcgag
aaagaggctggctctcctcctcctagtgatgaagatgacaggaagaaacgtaagaaaaag
aaacgtagtaggtctcgctctcgctcacgaagccgctcccattctcctcgaagacgaagc
tcaaggcgaagcagaagccgctctagggacagagacagacacaagtatcgtcgtcatcgc
cacagatcaaggtctcggtcccgctctcgtgacagaaggcgccatcgctcaagagaccgg
gattacagagacagagattatagagatagggatcgggacaaagggagagacagagataag
gagagagacagggataggaactctcctccttcagttgcacaacctataggtagctacaag
cgtcagaggtcacctgacctagagcctccgagtgttgatagggacaataggaccatcatg
tgtatgcagctgtcggccaaagtaaccaatagagaccttgaggacttcttcatgagagcc
ggagttgttcgtgatgtacacataattgctgacagacagtccaggcgatctaaaggtata
gcgtatgttgagtttcaagaagagagcagcgtgtttactgctctttctttcagtggacaa
aaggttcatgggataccgataatgattcaaccaactatggccgagaaaaacagactagca
gctgctgcagagaatctaaagaaagccgagggacctaagaagctctatgttggttccctg
cattacaatataacagaggacatgttgcaaggaatatttagcccatttggtaacgtggag
agggtcagcatcatgagggacactgctaccaatgtgtccaggggatatgcttttgtcgag
tttcgtgattccgactcggctgagagggcgatggctaacctcaatggatttgaattggca
ggtcgtccaatgaaagtgaactatgggacggtggacactagcctggtcaacattgattca
ctggacggggaggacatggacgtcggtgtggggatgacccctcaatctcgtgttgctctc
atgcacaaactagcagctggtcataatgcagatatgagtatacctggtgttcaggtccct
cctcctccttttgctgtgccaacaatgcctacttgtatcacctcctgctgctttgtgata
gggaacatgttcgatccttcaaaggagactggttctgactgggacaaagagatacgcgag
gacgtgcttgaggaatgcgtcaagtttggaaacatcttccatattcatgtagacaagttc
tcccagggcaaagtctacataaagtcccagaccccacagactgccagtgccgctgttggc
tcctttaatggtagacgctatgcaggtaacgtcattcatgccgagttggttccagagaat
acgtatcatttgaagttcccgggagctcttgcagcgactgtacctttgaagccttcgctc
tga
DBGET
integrated database retrieval system
