Amphimedon queenslandica (sponge): 100640546
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Entry
100640546 CDS
T02284
Name
(RefSeq) exosome complex component RRP46-like
KO
K12590
exosome complex component RRP46
Organism
aqu
Amphimedon queenslandica (sponge)
Pathway
aqu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aqu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100640546
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aqu03019
]
100640546
Messenger RNA biogenesis [BR:
aqu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
100640546
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
100640546
NCBI-ProteinID:
XP_011404798
UniProt:
A0A1X7ULB5
LinkDB
All DBs
Position
Unknown
AA seq
222 aa
AA seq
DB search
MNIIRHVVTMEVKSRGIECELGIITRADGSAQVKQGNTIVTCGVYGPVEAKSAREKVDKA
VVEVIVKSETGLPGPYEKELELLMSSCCETMILTHLHPHTAISVSIQIQSDNGSVIVCMV
HALCCSLLDACLPLKTTFSAIKCAFLSDGSMLTDPTTQQEETATSQLTYIIDRKGKLVAS
HATGSFDTEEYIKGLSVASSTAVHRTDFYRETISRKMSRIKQ
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcattagacacgtggtaacaatggaggtaaagagtagagggattgaatgtgaa
ctgggtatcattactagagctgatggatctgctcaagtaaagcaagggaacacaattgtg
acgtgcggtgtgtacggccctgtcgaagcgaaatcagctcgagagaaggtagacaaagct
gttgtcgaagtgattgtaaaaagtgaaactggtctgcccggcccatatgaaaaggaactg
gaattattgatgtcctcttgctgtgagacaatgatactcactcatttacaccctcatact
gccattagtgtcagcattcagatacagagtgacaatggctctgttattgtttgtatggtt
catgctttatgctgctcgcttcttgacgcttgtcttccactgaagactacattctctgct
attaaatgtgcttttctttctgatggtagcatgttaactgatcccactacacaacaggaa
gagactgcaacttcacagctaacatacatcattgataggaaagggaaactggtggcatca
catgcaacaggatcatttgatacagaagagtacataaaaggtctatcagtagcatcaagt
actgccgttcatagaacagacttctatcgtgaaactatttctcgtaaaatgtctcgaata
aaacaataa
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