Amphimedon queenslandica (sponge): 100640621
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Entry
100640621 CDS
T02284
Name
(RefSeq) TFIIH basal transcription factor complex helicase XPD subunit-like
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
aqu
Amphimedon queenslandica (sponge)
Pathway
aqu03022
Basal transcription factors
aqu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aqu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100640621
09124 Replication and repair
03420 Nucleotide excision repair
100640621
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aqu03021
]
100640621
03036 Chromosome and associated proteins [BR:
aqu03036
]
100640621
03400 DNA repair and recombination proteins [BR:
aqu03400
]
100640621
Enzymes [BR:
aqu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
100640621
Transcription machinery [BR:
aqu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
100640621
Chromosome and associated proteins [BR:
aqu03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
100640621
DNA repair and recombination proteins [BR:
aqu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
100640621
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
HBB
ResIII
DEAD
PhoH
nSTAND3
AAA_34
AAA_11
Motif
Other DBs
NCBI-GeneID:
100640621
NCBI-ProteinID:
XP_019851833
UniProt:
A0A1X7UXK2
LinkDB
All DBs
Position
Unknown
AA seq
754 aa
AA seq
DB search
MKINIDGLLVIFPYEYVYPEQYTYMLDLKRTLDAKGHCVLEMPCGTGKTVSLLALIIAYH
MAHPHHIQKLIYCSRTVQEINKAMSELKRLLDAYKSEFGSTPNVLGVALSSRKNLCIHPM
IAGNKEGKLVDTECYKLTASFVREKHKADKSTPVCQFFEEFDVKGRVDPLKPGVYDMDDL
KSLGQTKGWCPYYLARYTLGHATVIMYSYHYLLDPKIAEIVSKGLPQQSVVVFDEAHNID
NVCIESMSITIGRKTLEKCTANINNLQAKLRELGEERLRQEYQRLVEGLRRAREERENDI
QLANPVLPDDVLQEALPGNMRRGEHFLLFMKRFAEYLKSRLLARHVVSETPKYFLQNIYS
TVCIDRKPLRFCSERLHFMLQTLQLLELSDYSAITKVANFATLVSTYTEGFSLIIEPFDN
RAPTIFNPILHFSCMDAGIAIKPVFDHYTSVILTSATISPLDMYPRLLRFQPALLSSYGI
SLARPCICPIIVARGNDQVSITTKFEERGDTAIIRNYGNVVVELSSVIPDGIVAFFPSYE
YMEQTVHEWVDQGLMSKIQRNKLVFVETVDNAEMNMALNNYRKACENGRGALLLSVVRGK
VSEGVDFDHHYGRAVIMIGIPYVYTQSRILKARLEFLRDNFQIRENDFLTFDAMRNSAQC
IGRALRGKTDYGIMVFADKRYGRSDKKGKLPKWIQEHLSDAVCSLSIEESVHICKRFLRQ
MAQPFKKEEQIGLALLTLEQLREREEKRLANEPN
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcaatatagatggtctgcttgttatattcccatatgagtatgtatacccagag
caatacacgtacatgcttgatctcaaacgcacgctagatgctaaggggcactgtgtactg
gagatgccttgtggtactgggaagacggtatcattgctggcactcatcattgcttatcac
atggctcatcctcatcacattcaaaaactcatttattgctccaggactgtacaagaaatc
aacaaggcaatgtctgagctaaagagactattagatgcttataaatcagaatttggttct
acgccaaacgtactaggcgtggccctcagttcccgtaaaaacctttgcattcatccaatg
atagctggtaacaaggaggggaagctagttgatacagagtgttacaagttgacagcatct
tttgttagagagaaacacaaagctgataagagtacaccggtctgtcaattctttgaggag
tttgatgttaagggtagagttgacccattaaagcctggagtatatgacatggatgacctg
aagagcttaggacagacaaagggatggtgtccatattacctagcaagatatacgcttgga
catgcaaccgtcatcatgtacagctatcattacttgctcgatcctaaaattgcagagatt
gtctctaaggggctaccacagcaatcagttgtggtttttgacgaagctcacaacattgat
aatgtttgcattgagtcaatgagtatcacaattgggagaaagacgttagagaaatgtaca
gctaacattaacaatcttcaagctaaactgagagagttaggtgaggaaagattacgtcaa
gagtaccaaagactagttgaaggactaaggcgggctagagaagagagagagaatgacata
cagctggctaatcctgtactccctgacgatgtgctccaagaggctctgcctggtaatatg
agacgtggtgagcacttcttgctcttcatgaagagattcgctgaatatttaaagtcaaga
ttattggcgagacatgtcgtttctgaaactccaaaatattttcttcaaaatatctactcg
acagtctgcattgatagaaagccattgaggttttgttctgagaggttacacttcatgtta
cagactctccaattattagaattatctgattattctgccattactaaagtagccaatttt
gctacattagtctcgacttacacagaaggcttcagtctcattatcgagccttttgataat
cgtgctcctactatttttaaccccatcctccacttcagctgtatggacgctggtatagcc
ataaagccagtctttgatcattatacatcagtcattctcacatcagctacaatatcacct
ctagacatgtatcctagactcctcaggtttcaaccagctctgctcagttcttatggcata
tcattagcaagaccttgcatctgtccaataattgtagcccgtggtaatgatcaagtatct
ataactaccaaatttgaagagagaggagacactgcaataattcgtaattatggtaatgtt
gtggttgagctttcatcggtcatacctgatggcattgttgctttctttccatcttacgag
tacatggaacagacagttcatgaatgggttgatcagggcttgatgtcaaagatacagcga
aataagctagtctttgtggagactgttgataacgctgagatgaacatggctctcaataat
tacaggaaggcttgtgaaaatggccgtggggctcttcttctttctgttgttagggggaaa
gtatcagaaggtgtcgattttgatcatcattacgggagagccgtcataatgataggcata
ccgtacgtatatacacagagtaggatactaaaggcaaggcttgagttcttaagggacaat
ttccagatcagggagaatgatttcttgacatttgacgcaatgagaaactctgcacagtgt
attggcagagctttgagaggtaaaacagattatggtattatggtatttgctgataagaga
tatggacgcagtgataagaagggaaagctaccgaaatggatacaggagcatttgagtgac
gctgtttgtagcctttccattgaagaatctgttcacatatgcaagcgttttctaagacaa
atggcacagcctttcaagaaagaagaacagattggtcttgctcttttaacgctggagcaa
ctacgagagagggaagaaaaaagactagcaaatgaaccaaattga
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integrated database retrieval system
