Amphimedon queenslandica (sponge): 100640829
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Entry
100640829 CDS
T02284
Name
(RefSeq) transcription elongation factor SPT6-like
KO
K11292
transcription elongation factor SPT6
Organism
aqu
Amphimedon queenslandica (sponge)
Brite
KEGG Orthology (KO) [BR:
aqu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aqu03021
]
100640829
03036 Chromosome and associated proteins [BR:
aqu03036
]
100640829
Transcription machinery [BR:
aqu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
100640829
Chromosome and associated proteins [BR:
aqu03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
100640829
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
HTH_44
Tex_central_region
SPT6_acidic
Tex_YqgF
HHH_9
S1
Spt6_S1
SH2
S1_RRP5
HHH_3
Motif
Other DBs
NCBI-GeneID:
100640829
NCBI-ProteinID:
XP_019848744
UniProt:
A0A1X7VIA2
LinkDB
All DBs
Position
Unknown
AA seq
1525 aa
AA seq
DB search
MADDKEGFFDDEAEESEAEEEEEGGKGRRGGLLSSEDSEEEEDDDDGQDLEDLIDDNVVE
EEEGEGDEGRERKKRRKRSIDDQLDDEDYDVILENTGISVHKKFKRVQMFDSDDEEEGVV
NDEGVEPGPSDNEEELALDQSFDSNQSRQKGASRVEEEDDDEFGDFIVGDDGRPVGYKKT
DLFSEPALLEAQEIFGVDFKPSDFGLGSDEEGEEEEVGEEEEREDDDDEMDGEVGVRVKK
RKKKSKNRSIYDVYEPSELERSHLTDQDKIIRITDVPERYQTRAIPVRSSDEGELQLESD
WVYHQAFCSPPVSNQPYSQHTQQQRAGAVSNAKSPSAIPKIKEALNFMRNYFFEVPFIGT
YRREYVEPELNMEDLWKIYYWDEKWMQLQQRKKDLKKLFKRIQDWQFNKVKEEPERALNE
DYRTLDTDDILRLDAVQTEEELSDVYAHFMLYYGRDLIAMKNKRESTADTDNDDVLKTTV
KQSKKKDYYSLCQEAGLGALASKFGLTPEQFGENLRDNYQRHETEQHPYEPEEAAQEFIQ
TSGLFVNVRAVLQGACHMVAMQLASEPLVRQALRQVYQTRAVINVSPTKKGRKEIDESHS
IFSYKYIKNKPVREIKGDEFLRLHQAETDGLINVKISIDIEQSSYDKRGQSSTFLEEIRI
LFYRDEFSLLVEKWNAQRAQSVAQCLMKVLYPQMEKELRAKLLAEAKEHVLQCCVLKFRN
WLDVGNSLTSRDEDEVINESETSHRVMAVAYSDDWSVPSFACFLNGNGEVLDYLRLAYIH
KRVNVNSEVEKEQKEEETRKLRQTMEKRKPDVVVVAASSRQALSVIDELKTCLVEADGVA
PPTIELMDPNISEIYSKSNRAKEEFPSYPQLLLCAISLGRRVQEPLYEFTSLLSSHDEEY
LSLILHPLQRSLSVEDLKKGLEVELVNKVNSIGVDINFCIEHSHAEHMLPYVAGFGPRKS
TGLLKLLRQENIQLQNRSQIVTQCSIGPQVFINCAGFIKVLPSTFTVSDSAYVEVLDSTR
VHPETYEWARKMAFDALEYYDEVGDESNPSAAVEDVMDTPEKLKDLDLDAFADELRRQEY
GDKGLTLYDIRDELFAPFRDNRQMFGKMSADERFTLLTGETHDTIHEGKLITCTVVGIAR
RRPNQEALTQANPIRDQTGYWQCPFCLASDFADVSRVWSHVDSHECPGQPVGVRTRLENG
LNGFIAIKNISDSLVHNPEDRVKPGMTIHCRILSVNIEKFSVDLTCRSSDLIDKAGKFSI
TRDIYFDYEAAEADSKKDRAATQQKPKDRYLKRVIVHPSFKNVSFLEAQKLLMNMEQGEA
IFRPSSQGVDQLTLTWKVTDSIIQHVNIKEEGKPNQFSIGKSLLIGNEEYEDLDEILARY
VQPLAGNVRDILTYKYYNEANGGDKRILEKLLKDEKTKHPKKIPYFLSASREHPGKFILS
YQPSTRAKFEYVGIKPEGYWYRGQLFRSVNSLINWFKENFRAAPVIRHTPTPSVSSATPS
FRGIPSSVRGATPYTPGQWDKTPVM
NT seq
4578 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgacaaggagggattctttgacgatgaagccgaagaatctgaagccgaagag
gaagaggaaggcgggaaaggaaggagaggaggcctcctcagtagtgaagactcggaggaa
gaagaagatgatgatgatgggcaagatcttgaagacttgattgatgataatgtggtagag
gaggaggagggggagggggacgaggggagggagaggaagaaacgtcggaagagaagtatt
gacgaccaattagatgatgaagattatgacgtcattttagaaaacacaggaatcagtgta
cacaagaaattcaaacgtgtacaaatgtttgatagtgacgatgaagaagagggcgtggtc
aatgacgagggtgtggagccaggtccatcagataacgaggaagaattggctctagatcaa
tcatttgattcaaatcagtctcggcaaaagggtgccagtagggttgaagaggaagatgat
gatgaatttggtgatttcattgttggggatgatgggagaccagtcggctacaagaaaact
gatttattttcagaaccagcactactagaggcccaggagatatttggcgtcgattttaaa
ccgtcggattttggactgggatcagacgaggagggagaggaggaggaggtaggagaggag
gaggagagagaagacgatgatgatgaaatggatggtgaagtgggtgtgagagttaaaaag
agaaagaagaaatcaaagaacaggagtatctatgacgtttatgagccgagtgagctggag
agaagccacctaactgaccaggacaagataatacgaataactgacgtaccagaacgatac
caaactagagctataccagttcgtagcagtgacgagggagagttgcagctggagtcagac
tgggtctaccatcaagcgttctgctcccctcctgtctccaaccagccttactcccagcac
acacagcaacagagagcaggtgccgtgtctaatgccaaatcaccctcagccattcctaaa
ataaaggaagctttgaactttatgcgaaattatttctttgaagttccttttattggaaca
tatcgtagagaatacgtagagcctgaactgaacatggaggacttgtggaagatttattac
tgggacgagaagtggatgcagctgcaacagagaaagaaagatttaaagaagttgttcaag
aggatccaggactggcagtttaacaaagtgaaggaggagcccgagagagctctgaatgaa
gactatcggacacttgacactgacgatatacttaggttggatgcagtacagacagaagaa
gagctgtcagatgtttacgcccacttcatgttgtattatgggcgtgacctgatagcaatg
aagaataagagagagtctactgctgatactgataatgatgatgtgctaaagaccactgtg
aaacaatctaagaagaaggactattattctttatgtcaagaggctggtttgggtgctctg
gcttcaaagtttggtctaactccggagcaattcggagagaacttgagagacaactaccaa
agacacgagacagagcagcatccttatgaaccagaagaagcagctcaggaatttatacaa
acatcaggtttgtttgttaacgtcagagctgtgttgcagggggcatgtcacatggttgct
atgcaactcgcctcagaacctctggtacgacaagcactgagacaagtctatcagactagg
gcagtcattaatgtatcacctaccaaaaaaggaagaaaagagatagatgaatctcattca
atattctcttataagtatattaagaataaaccggtccgtgagattaaaggagatgagttt
ctgaggctccatcaagcggagactgatggattaattaatgttaagatatcaatagacatt
gagcaatcatcttacgataagagaggtcagtcgtcgacattccttgaagaaataagaatc
ctgttttatagagatgagttcagtttgctggtagagaaatggaatgcccagcgtgcccag
tcggtggcccagtgtctgatgaaggtgctctatcctcaaatggagaaagagttgagagct
aaactgttagcggaagctaaggaacacgtactacagtgctgcgtgttgaagttcaggaac
tggttggacgtgggtaactccctcacctcaagagatgaggatgaagtcatcaacgagtct
gagaccagtcacagggtaatggccgtggcttactctgacgactggagtgtccctagtttt
gcttgttttttaaacggtaacggcgaggtactggattacctgagactagcttacattcat
aaaagagttaacgttaacagtgaagtggagaaggagcagaaggaggaggagactaggaag
ttacggcagacgatggaaaagagaaaacctgatgttgttgtagtagctgcttcatcaagg
caagctctaagtgtcattgatgaattaaagacgtgtctagttgaagctgatggtgtagcc
ccgcccactattgaactaatggatccgaatatatcagaaatatactcaaaatccaacaga
gctaaagaggagtttcccagctacccccagttattattgtgtgccatttctttgggtcga
cgtgtacaggaacccttgtacgagttcacgtcacttttgtcctcacacgatgaagaatat
ctatcattgatactccacccactccagaggtctttatcagtcgaggacctgaagaaagga
ctggaggtggagctagttaataaagttaactcaattggtgttgatattaacttctgtatt
gagcactcacatgctgagcacatgctaccctatgtggctggttttggaccgaggaaatca
actgggctccttaaactgttacgtcaggagaacatacagctccagaacaggtctcagatt
gttacccagtgttccattggtcctcaggtattcatcaactgtgctggattcattaaagta
ctgccgtctaccttcactgtcagtgattctgcgtacgtggaggtccttgacagcactaga
gttcatcctgagacctacgagtgggcaagaaaaatggccttcgatgctcttgagtattat
gacgaggtgggtgatgagtccaatcccagtgcagctgttgaggacgtgatggacacacct
gagaaactaaaggaccttgatttggacgccttcgctgatgagctacgcagacaagagtat
ggtgataagggactgacattgtatgatattcgtgacgagttgtttgctcctttcagagac
aatagacaaatgtttggtaaaatgtctgcagatgaaagattcactttattaactggtgag
actcatgatactattcacgagggtaagctgatcacctgcactgtggttgggatagccagg
agacgtcccaatcaagaggcactgacacaagctaatccaataagagaccagaccggctat
tggcagtgccccttctgtttagcgtctgattttgctgacgtcagcagagtgtggtctcat
gttgacagccacgagtgtcctggtcagccagtcggagtaagaacgagattagaaaacggg
ttaaacgggtttattgctatcaagaacatcagcgacagtttggtacataatcctgaggac
agggtcaagcctggtatgaccatacactgtcgtatattatcagttaatattgagaagttt
tcagttgatttgacttgccgtagctcagacctcatcgacaaggcagggaaatttagcata
acgagggatatctattttgattatgaagcagctgaagctgatagtaagaaagaccgggct
gccactcaacagaaaccaaaagataggtacttgaagagggttatcgttcatccttcgttt
aaaaatgtgtcatttttggaggctcagaagttgctgatgaacatggagcaaggagaagcc
atatttagaccgagcagtcaaggtgttgatcagttaactctaacctggaaggttacggac
tccatcatacaacacgttaacatcaaagaggagggaaaaccaaaccagtttagcataggg
aagtcacttttaattggaaacgaagaatatgaagatttggatgaaatactggccagatat
gttcagccattagctggtaacgtccgagacatattgacttacaagtattacaatgaagct
aatggcggagacaagaggatccttgagaaactcctcaaagacgagaagaccaagcaccct
aagaagataccttatttcctgagcgcctccagggagcaccccggcaagtttatactatca
taccagccgtcaactagagcaaagtttgaatacgttggtataaaaccggagggatactgg
tacagagggcagctgttccgaagtgttaatagtctcatcaattggttcaaggagaacttt
agagccgcacccgttataaggcacacgcccactcctagcgtcagtagtgccacgccctct
tttaggggtatcccctcgtctgtcaggggggcgaccccttacacccctggtcagtgggac
aagacacctgtaatgtag
DBGET
integrated database retrieval system
