Amphimedon queenslandica (sponge): 100641134
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Entry
100641134 CDS
T02284
Name
(RefSeq) DNA excision repair protein ERCC-8-like
KO
K10570
DNA excision repair protein ERCC-8
Organism
aqu
Amphimedon queenslandica (sponge)
Pathway
aqu03420
Nucleotide excision repair
aqu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
aqu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100641134
09124 Replication and repair
03420 Nucleotide excision repair
100641134
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aqu04121
]
100641134
03400 DNA repair and recombination proteins [BR:
aqu03400
]
100641134
Ubiquitin system [BR:
aqu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
100641134
DNA repair and recombination proteins [BR:
aqu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Cul4-CSA complex
100641134
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
NBCH_WD40
Beta-prop_RIG_2nd
Beta-prop_EML
ANAPC4_WD40
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
WD_LRWD1
Beta-prop_Vps41
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_RIG_1st
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
100641134
NCBI-ProteinID:
XP_019854500
UniProt:
A0A1X7UGN6
LinkDB
All DBs
Position
Unknown
AA seq
389 aa
AA seq
DB search
MIQLLRDRRAGLEEEWTLPKVYATHKWTQLSLSRNREFERSHDNGITSMQLDHTSQRYLL
SGTTDGSIFIQDTRYQVGVARQTCPTVAFNRGSTTPSSHTHSISELKWYPHDTGIFTSSS
MDKTLRIWDTNEMCVVENFKMSTPIYTHDLAKAIKHTLTAVGTKDGIVTICDMNSGSSSH
ILKRHKKPVMTVQWSPSDEYTLATGSQDNQILFWDIRKTRCPLVSLDQHNGSQGKNSTAH
NGYVLGLQFTTDGLFLISSGSDQRLRLWDVSSTSNMLINYGRIPHSFKNQTHHFSLTPPS
LSFTPHLLVPSHSDVSIYELFTGRNVSKLKGHYSSVTSIDVNSNDIEVYTGSTDNTVLIW
TAVNSIELNTESKLSRQSVIYNDTWSDED
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgatccagctcctaagggacaggagggcggggcttgaagaggaatggacactccccaag
gtctacgctacccacaaatggactcaactatcactgagcaggaacagagaatttgaaaga
tcacatgacaacggaattacatcaatgcaactagaccacacctcccaaagatatttattg
tcaggtacaaccgatggctccattttcattcaagacactcgttatcaagtgggcgtggct
cgtcaaacctgtcctacagttgcattcaatcgtggaagcaccacaccctcatctcacact
cacagtatatcagagctgaagtggtaccctcatgatactgggatctttaccagttcctcg
atggataaaaccttaagaatatgggatactaatgagatgtgtgtagtggagaattttaaa
atgagtactccaatttatactcatgatttagcaaaagcaataaagcacactttgacagct
gttggtaccaaagatggcatcgttaccatatgtgatatgaactctggctccagtagtcat
atattgaagagacacaagaaaccagtaatgacagtacaatggtcgccttctgatgaatac
accctagctacaggaagtcaggataatcagattttattttgggatattcgtaagacaaga
tgtcctttggtatcgcttgatcaacacaatggcagccaaggaaaaaactctacagcacac
aatggttatgtattaggtctccagttcacaactgatggtctattccttatcagctccgga
tcagaccaacgtcttagactatgggatgtatcctcaacttctaacatgctaattaactat
ggccggatccctcactcgtttaaaaatcagactcaccacttctctcttactcctccctct
ctctccttcactcctcatcttttagttccctctcattctgatgtgagtatatatgaactg
tttactggtagaaatgttagtaaactgaaaggtcattatagcagcgttacaagtattgat
gttaattctaatgatattgaagtgtatactggtagtactgataatacagtactgatatgg
actgctgttaatagtattgagcttaatacagaatcaaaattatcaagacaatcagtgatt
tataatgacacttggagtgatgaagattaa
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integrated database retrieval system
