KEGG   Amphimedon queenslandica (sponge): 100641246
Entry
100641246         CDS       T02284                                 
Name
(RefSeq) pre-mRNA-processing factor 19-like
  KO
K10599  pre-mRNA-processing factor 19 [EC:2.3.2.27]
Organism
aqu  Amphimedon queenslandica (sponge)
Pathway
aqu03040  Spliceosome
aqu04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:aqu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100641246
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    100641246
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:aqu03041]
    100641246
   04121 Ubiquitin system [BR:aqu04121]
    100641246
   03400 DNA repair and recombination proteins [BR:aqu03400]
    100641246
Enzymes [BR:aqu01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     100641246
Spliceosome [BR:aqu03041]
 Complex B
  Other components
   Prp19 complex
    100641246
 Complex C
   Prp19-CDC5 complex
    100641246
Ubiquitin system [BR:aqu04121]
 Ubiquitin ligases (E3)
  U-box type E3
   100641246
DNA repair and recombination proteins [BR:aqu03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    100641246
SSDB
Motif
Pfam: WD40_Prp19 Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 Beta-prop_IFT122_1st WD40_WDHD1_1st Prp19 Beta-prop_EML_2 Beta-prop_WDR3_2nd WD40_CDC20-Fz WD40_Gbeta WDR55 Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_WDR75_1st Beta-prop_EML WD40_MABP1-WDR62_1st Beta-prop_SCAP ANAPC4_WD40 Beta-prop_NOL10_N DSE1_N CFAP251_N Beta-prop_Vps41 Beta-prop_IFT140_1st Beta-prop_Aladin NBCH_WD40 Beta-prop_EIPR1 ASA1 Beta-prop_VPS8 Beta-prop_HPS5 Beta-prop_WDR19_1st Beta-prop_DCAF12 Beta-prop_WDR41 U-box Beta-prop_RIG_2nd WDR90_beta-prop_4th PEP5_VPS11_N PAC11 Beta-prop_SPT8 eIF2A Ge1_WD40 zf-Nse Beta-prop_DCAF4 Tricorn_2nd Beta-prop_ACSF4 Cytochrom_D1 Beta-prop_WDR35_TULP_N PAS_11 RMC1_N zf-C3HC4_2 zf-RING_UBOX
Other DBs
NCBI-GeneID: 100641246
NCBI-ProteinID: XP_003385193
UniProt: A0A1X7V885
LinkDB
Position
Unknown
AA seq 502 aa
MALICSICQEVPEEPVLSVVSNHVFERRLILKYLQENGTDPINGEPLEESQLLEIKSSPL
VKPRPPSATSIPAILKLLQDEWDSCMLHTFTLRQQLQTARQELSHALYQHDAACRVIARL
TKEVNGAREALATLKPQAAAYMPPGATEAPTGAEAMDNTEAGPTEMTEEILQQLLETAAM
LTADRKKRGKKKPEGLCTVEEMKTFEQKSSHPGLHSSSVPGILALDVSADSKRVLTGGAD
KTAIVFIKDTEQIYATMKGHTKKISSVIYHPKVELAITGSADSTVRVWSIDTSVCAQTIK
AHDGGVTSVSLHPTGSYLLTSSTDDYWAFSDITSGHVLTKANSPSGPTALTCAQFHPDGL
IFGTGTASSEVRIWDLKERTNVANFQGHSGAITSIAFSENGYYLATGAEDSQVQLWDLRN
LKNFETINLGKGYEVKNVSFDVSGTYLAIAGTDIQVYLCKQWDQLATLKDHTSVVNGIKF
GHNASFLASCSMDRTLRFFAPQ
NT seq 1509 nt   +upstreamnt  +downstreamnt
atggcgctcatttgctcaatttgccaagaagtaccagaagagcctgttctctcagttgtc
tccaaccacgtgtttgagaggcgccttatcctaaagtatctgcaggagaacgggactgac
cctattaatggagagcctttggaagagagccaattactggagattaaatcttcgccattg
gtaaagcctagacctccctctgctaccagcatcccagcaattttgaaactgttacaagat
gaatgggattcttgcatgctgcatacttttacacttcgtcagcaactacagacagcaaga
caagaactctcccatgctttgtaccagcacgatgctgcctgtcgcgtgattgctcgactc
acaaaagaagtgaatggggccagagaagctcttgctactcttaaacctcaggcagctgct
tatatgcctccaggcgctactgaagctccgactggtgctgaagcaatggacaatactgaa
gctggtccaactgaaatgacagaagaaatattacaacaactactagagacagctgccatg
ctcacggctgaccgtaagaagagaggcaagaagaaacctgaaggattatgtacggtagag
gagatgaagacatttgaacagaaatcatctcatccaggtcttcacagctcaagcgttccg
ggaatattggcactcgacgtgtctgccgactcaaaacgagttctcacaggtggagcggat
aagactgccatcgtgtttataaaagacactgaacagatttatgctaccatgaaaggtcat
accaagaagatttcaagcgtcatctatcacccgaaagtggaattggctatcaccggttct
gctgattcgaccgtgagggtgtggtcgattgatacaagcgtttgtgctcagactattaaa
gctcatgacggaggtgtgactagtgttagtctccatccaactgggagctatctgctaaca
tcgtctacagatgattattgggcgttttctgacattacgagtggtcatgtattgacgaaa
gctaacagtccctctggaccaactgctttgacttgtgcccagttccatcctgatggcctt
atttttggtactggaacggctagcagcgaggtgaggatttgggatctcaaagaacgtacg
aatgttgctaatttccaaggacactccggagccattaccagtattgcattctctgagaat
ggttattatcttgctactggggcagaggattcacaagttcagctctgggatttgagaaac
ttgaaaaactttgagacgatcaatcttggaaaaggatatgaggttaagaatgtttcattt
gatgtcagtggtacttaccttgccatagcaggaactgatatacaggtctacctctgcaag
caatgggatcagttagccacactcaaagatcatacttctgttgtaaatggtatcaagttt
ggacacaatgcctcgttcctcgccagctgcagtatggatagaaccctgaggttctttgct
ccgcaataa

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