Amphimedon queenslandica (sponge): 100641283
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Entry
100641283 CDS
T02284
Name
(RefSeq) cleavage stimulation factor subunit 3
KO
K14408
cleavage stimulation factor subunit 3
Organism
aqu
Amphimedon queenslandica (sponge)
Pathway
aqu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aqu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100641283
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aqu03019
]
100641283
Messenger RNA biogenesis [BR:
aqu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
100641283
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
NRDE-2
RHD3_GTPase
Motif
Other DBs
NCBI-GeneID:
100641283
NCBI-ProteinID:
XP_019857540
UniProt:
A0A1X7VP66
LinkDB
All DBs
Position
Unknown
AA seq
705 aa
AA seq
DB search
MESHPLVNLGMKGSATSSKESDESWSMTDYGKRAEAKISVHPFDLDSWEVLLREAQTATI
VRSRAFYEHLVTQFPTSARYWRMYIEQEMRHRCYEEVEKLFQRCLMDILHIDLWKLYITY
IRETKSGLPNYREKLKNAYDFTLEHMGIDFYSTPIWMEYLDFLNSENSQGSYGENLKLQS
MRKTFQLAVASPKVSIEQVWKDYSAFENMANKSLAKKVLEVQNKLYSNAKRASYEYENVT
RGLVRGSTSVPPQGAIQEAQQLQIWRRYLAWEKQNPLRTEDVKLIIKRVVYAYNQCLLCF
GHCSDIWYELTLYLQRAGESDPPRSHQWIEEAGTVYTRAVSGPLANNLLMNFAFADFEEV
QQHNDKAESIYNRLLSTIEDESKTLVYIQYMNFKRRTAGIKGARTVFKKAREDTKCNYHA
YVAAALMEYYITKDKDIAFRIFELGMKKFGTNVGFLLAYVDYLSHLNDDNNTRVLFEKAV
STVPPDESSKLWEQFSRFELAVGDLSSLLKVERRRANMLQRSQEAEVSETSLLIDRYTYL
DLFPCSELELRVIGHHSVANPIDTATAPVFLKAPVSNNESSKADSHYSKPDLKQMISFKP
STTHGVGMNAVPGGHFPLPSSLANLLSLLPPPHCFQGPFVQVDQLIDMIIHSSIPEISSS
QPGLSSTRVINQKRRRDDGEDFDEETAPPSNDLYISRQQKRAQTT
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atggagagccatcctttagtgaatcttggcatgaagggctctgccacctcttcgaaagag
tctgatgagtcctggtcaatgacggactatggtaaaagagctgaagcaaagatatcagtt
catccatttgatcttgacagctgggaggtactattaagggaagcacagacagcaaccata
gttcggtcaagagcgttttatgaacatttagttactcagtttccaacttcggctcgttac
tggaggatgtacatagaacaggagatgagacatcgctgctatgaggaagtagagaagttg
tttcagagatgtctaatggacattcttcacattgacctttggaagctatacattacttat
atccgtgagacaaaatctggtcttccaaactacagagagaagttgaaaaatgcatatgat
tttactctagagcacatgggcatagatttttattctacgccgatttggatggagtacttg
gatttccttaattcagaaaactctcaaggatcttatggggagaatctcaagctacagtcg
atgaggaagactttccaactggcagttgcatctccaaaggtctccattgagcaagtttgg
aaggactactcagcttttgaaaatatggccaataaatctcttgcaaagaaagtccttgag
gtccagaacaagctttattcaaatgctaaacgtgcttcatacgagtatgagaatgtaacc
agagggttggtgaggggcagcacttcagtaccacctcaaggagcaatacaggaagcacag
cagcttcagatatggcgtcgttatttggcatgggagaagcagaacccactcagaacagaa
gatgtaaaattaataattaagagagttgtctatgcttacaatcaatgtctgctctgcttt
ggtcattgctctgatatctggtatgagctaacactttacttgcaaagagcaggagaatca
gatccccctcggtcccatcaatggatagaggaagcagggacagtgtacacacgtgctgtc
tcaggccctctggctaataatttactcatgaactttgcttttgctgactttgaagaggtg
caacagcataacgataaagcagagtccatttataatcgtctcctctctaccattgaagat
gagagcaagacattggtctatatacagtatatgaacttcaaaaggaggacagctggtatt
aaaggagctcgtactgtcttcaagaaagcaagagaggacacaaagtgcaattatcatgct
tatgtagctgcagctctgatggaatactacataacaaaggacaaggacattgctttcagg
atatttgagttgggtatgaagaagtttggaactaatgttggcttcctgttagcatatgtt
gactacctttctcatttaaatgatgataataacacaagagtgttgtttgagaaggcagtc
agtacagtcccacctgatgaatcaagcaaactatgggagcagttttcaagatttgaattg
gctgttggtgacctttcaagcttattaaaagttgaaagaagacgtgcaaacatgctccag
agatctcaagaggctgaagtgtctgaaacatctctacttattgatagatatacttacttg
gatctcttcccatgctctgaactggagcttagagttattggtcatcattctgtggctaat
cctattgatactgcaactgctccagtatttctcaaagctcctgtatctaataatgaatca
tcaaaggctgattcgcattactcaaaacctgatctcaagcaaatgatatcattcaagcct
agcactacacatggtgtaggtatgaatgctgttcctggcggtcattttcctcttccttca
agtttagctaatttgctctccctcttaccccctcctcattgctttcagggtccttttgta
caagtggatcaattgatagacatgatcattcacagttcaataccagagatatccagttcc
cagccaggactcagctctacgagagtcattaatcagaaaagacgaagagatgatggggag
gatttcgatgaggagactgccccaccttctaacgacctttacatctcaagacaacagaaa
agggcacaaacgacataa
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