Amphimedon queenslandica (sponge): 100641369
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Entry
100641369 CDS
T02284
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15-like
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
aqu
Amphimedon queenslandica (sponge)
Pathway
aqu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aqu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100641369
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aqu03041
]
100641369
03009 Ribosome biogenesis [BR:
aqu03009
]
100641369
Enzymes [BR:
aqu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
100641369
Spliceosome [BR:
aqu03041
]
Complex A
U2 snRNP components
U2 related factors
100641369
Complex B
100641369
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
100641369
Ribosome biogenesis [BR:
aqu03009
]
Eukaryotic type
90S particles
Helicases
100641369
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
DEAD
AAA_22
AAA_19
nSTAND3
ResIII
Flavi_DEAD
SRP54
ABC_tran
ATPase
AAA_7
AAA_30
AAA_29
TsaE
T2SSE
PhoH
AAA_16
Microtub_bd
AAA_25
Motif
Other DBs
NCBI-GeneID:
100641369
NCBI-ProteinID:
XP_011410574
LinkDB
All DBs
Position
Unknown
AA seq
471 aa
AA seq
DB search
MSERKRRLDVEDSKSTKSGRYDNDKENGGGMSSSKQQINKYTGRPFSQKFWQILTKRKTL
PVWDYYDKFIETIKKNKCVVLVGETGSGKTTQIPQWLSEYAQLTGRKGVACTQPRRVAAM
SVAQRVADEMDVTLGQEVGYNIRFEDCTSARTILRYMTDGMLLREAMNDPLLERYSVVLL
DEAHERTLATDILMGIIKEIMNNREDIKIVIMSATLDAGKFQTYFDDAPLISIPGRTHPV
EIFYTPEPERDYLEASIRTVVQIHLCEEMEGDVLLFLTGQEEIDEACKRIQREVENLGPE
IGELKCIPLYSTLPPNLQQRIFEPPPPKRENGAVGRKVVVATNIAETSLTIDGVVFVIDP
GFSKQKVYNPRIRVESLLVSAISKASAQQRAGRAGRTKPGKCFRLYTEKAYQNEMQDNTY
PEILRSNLGTVVLQLKKLGIDDLVHFDFMDPPGNAYLTTTNTVNCLVLKWS
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagaggaaaagacgtttagacgtagaagattcgaaatcaacaaagtccggtcgc
tatgacaacgataaagaaaatggcggagggatgagtagctcgaagcagcagatcaacaaa
tacactggacgacctttctctcagaagttctggcagatactcacgaaacgtaaaacccta
ccagtctgggactactatgacaagttcatagagactataaagaagaacaaatgtgtagtc
cttgtgggggaaactgggagtggtaaaacaacacagatcccccagtggctctcggaatac
gctcagttgactggtagaaagggagtggcttgtacccagcctcgtagggtggcggccatg
agtgtggcccagagagtagctgatgaaatggatgttaccctcggacaggaagttggttat
aatattcgttttgaggactgcacctcagcaaggactatactgagatacatgactgatggg
atgctcctaagagaagcaatgaatgacccactgttggagcggtacagtgtagtgttactg
gatgaggcacacgagagaaccctagcaaccgatatactgatgggtatcatcaaagaaata
atgaataacagagaagatattaagatagttattatgagtgcaactttagacgctgggaaa
tttcaaacttattttgatgacgcaccattaattagcatccctggcaggacccatcctgtt
gagatattctacaccccagagcctgagagagactatcttgaggcctccattaggacagtg
gtacagattcatctctgtgaggagatggagggagacgtgttactgtttctcactggacaa
gaagagattgatgaggcttgtaaaaggatccagcgtgaggttgagaaccttgggcctgag
atcggagaactgaaatgcatcccactctactccaccctcccccctaacctccagcaaaga
atattcgagccccctccaccaaagagggagaatggagctgtaggtcgtaaggttgtcgtg
gcaaccaacattgctgaaacatcactaactattgatggagtagtgtttgtcattgaccct
ggcttctctaagcagaaggtgtacaacccacggataagggtagagtcactcctggtgtca
gccattagtaaggccagtgcccagcagagagctggcagggctggtcgtactaagccaggg
aagtgtttccggctttatacagagaaggcatatcaaaatgaaatgcaagacaatacctac
ccagagatactccgctccaacctggggactgtggtattgcagctgaagaagcttggtatt
gatgatctggtccactttgattttatggatccacctggtaatgcctacctcacaactaca
aatacagttaattgccttgttttaaaatggtcgtaa
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