Amphimedon queenslandica (sponge): 100641387
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Entry
100641387 CDS
T02284
Name
(RefSeq) probable global transcription activator SNF2L2
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
aqu
Amphimedon queenslandica (sponge)
Pathway
aqu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
aqu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100641387
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aqu03021
]
100641387
03036 Chromosome and associated proteins [BR:
aqu03036
]
100641387
Transcription machinery [BR:
aqu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
100641387
Chromosome and associated proteins [BR:
aqu03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
100641387
Chromatin remodeling factors
BAF complex
100641387
PBAF complex
100641387
GBAF(ncBAF) complex
100641387
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Bromodomain
SnAC
HSA
BRK
ResIII
QLQ
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
100641387
NCBI-ProteinID:
XP_019854497
UniProt:
A0A1X7UFV1
LinkDB
All DBs
Position
Unknown
AA seq
1481 aa
AA seq
DB search
MAASGGAPPTVSPFTGGGGSGPGGPPMGSNMSLYQQVPPNSSLPPGMRGGMQDVDSMYSM
GGAQMMGGAYGGHMPPGGMVHVPPNVGIGSYSNPSMGLRPHLKPPTNLSAIQMKLLSAQI
KAYRCLARNMPLPDQIKNLVMSHAANVSSHAPSSSSDTTLSRSSPKPPPVTGGNQATRAT
EEVKSEEGKGGGGGKVEGAPVAGKGQAQLKQVKLVPTGKPPGIDPEIILKEREARIKARI
AHRIVDLQSIQGGTLPDPTLRKAMIELRALRLLEFQRQLRAEILSHARRSTTLETALNLR
GYKRPKRQSLREARITEKLEKQQKVEQERRKRQKHQEFLSSVLQHARDFKEFHRLNIGKM
SKLGKAVLNHHATLEREQKKEQERLEKERLRRLMAEDEEGYRKLIDKQKNKRLAYLLQQT
DEYIESLIEMVKKHKDDLMALKKRRKSSRRGTVSEGQSGDKDPNERVTVIETSTGNKLSG
EEAPKREELEAWLKEHPGYEVIEEENSDEETEDDDDAIKATSPTPTTPGATDIDPNDPTA
IIAKASANADDEYSSKTSDKNYYSIAHTFRESIEKQPTLLQFGTLKEYQIKGLEWLVSLY
NNNLNGILADEMGLGKTIQTIALVTYLMENKGNNGPFLIIVPLSTLSNWDLEFDRWAPSV
VRVVWKGPPLVRRSLANQIKSVRFNVLLTTYEYVMKDKGPLSKTKWKYMIIDEGHRMKNH
HCKLTQILNQYYEAPHRLLLTGTPLQNNLPELWALLNFLLPTIFQSCNNFEQWFNAPFAM
TGEKVELNEEEKILIIRRLHKVLRPFLLRRLKKEVENQLPDKVEYVIKCDMSALQRQMYV
HMQKKGILLTDGSETNRKGKGGARALMNTIMQLRKICNHPFMFEEIEDAILEHQGLSGNT
PNASIATTADLYRASGKFELLDRMLPKFKETGHRILLFCQMTQLMTIMEDYLQWRGYLYL
RLDGATKADDRGQLLELFNAPNSPYFLFLLSTRAGGLGLNLQVADTVIIFDSDWNPHQDL
QAQDRAHRIGQKNEVRVLRLCTVNSVEEKILAAAKYKLNVDEKVIQAGMFDQKSTGSERK
AFLVAILEDEQAEEEEQEVADDEALNDMIARNEEELELFQRMDLERAAREAMDPSLRHKP
RLIQEDELPSWLLRDTEEVEQMAFEENEERLFGLGKRQRKEVDYSEALTEKQWVKALEDG
TLEEVEETKKNRKKRKRKDIALLGEETKSKKRKKATAGVSAKLTRLLISLWEAVVAYQDS
TNRRISEIFMVLPTRRELPEYYQIIKKPIDLKKIKDKIMKQKYQCLSDMEDDVILLCGNA
RTYNEEGSQIYTDSIELERVFMEAKAQLDVDEYGGVDSDDERQVSVEVDDYNSDTSDVSL
NRHHSGSSMSNTPAPSGGGASVSGSLPPSVARSTSSSSKARRSRKGRPKKHERVPLIIES
DNEESAPVTPEFITGSPASSYTSSLVPSPASSSTSFSRRKY
NT seq
4446 nt
NT seq
+upstream
nt +downstream
nt
atggcggcttctggaggagctcctccaacagtgtctccctttacaggaggaggcgggagc
ggtccagggggacctccaatgggtagtaacatgtctctttatcaacaggtcccgcctaac
agcagtcttcctcctggaatgagaggtggaatgcaagatgtggactcgatgtacagtatg
ggtggggctcagatgatgggcggagcttatggcggtcacatgccccccgggggaatggta
cacgtacctccaaatgtcggaattggttcatactcgaacccaagtatgggactccgccca
catttaaaaccgcccacgaacctctcggcgattcaaatgaagttattgagcgctcagatt
aaagcgtatcggtgtctcgctcgtaacatgcccctcccagatcagattaaaaatctcgtt
atgagtcatgccgctaatgtgagtagccatgccccctcctcgtcatcagatacaacttta
tcacgatcgtctccaaagccacctcccgttaccgggggcaaccaggctaccagagcgacc
gaggaagtgaagagtgaggagggaaaaggaggaggagggggaaaagttgagggtgcgcct
gtcgctggtaagggccaggctcaattgaaacaggttaaactagtaccgactggtaaaccg
ccagggattgatcctgagattatactgaaagagagagaggcgaggattaaagctaggata
gctcatcgtatcgttgacctccagtccatacaaggcggcactcttcctgaccccaccctc
cgcaaggcaatgatagaactaagagcgcttcgtctcttggagttccagcgtcaattacgg
gccgagatcctttctcacgctcgacgttcgacgactttggagacagcgttgaatttgaga
ggatataagagaccaaagaggcagagtctgagggaagcgaggataactgagaagctggag
aaacagcaaaaagtggagcaggagagacggaagagacaaaagcatcaggagtttttatcc
agtgttctccagcatgctcgtgattttaaagagttccatcgactcaatataggaaagatg
tcaaagttagggaaggcagtcctcaatcatcatgctacattagagagggagcagaagaaa
gagcaagagagattggagaaggaaagactcaggagactaatggctgaagatgaagaaggc
tacagaaaactgattgacaagcagaagaacaagcgattggcttatctcttgcaacaaact
gacgaatacattgagagccttattgaaatggtgaagaaacacaaagacgatctaatggca
cttaagaaaaggagaaaatcatctcgtaggggaactgtatcagaaggtcaaagtggcgat
aaggatccaaatgagagagtgacagtcattgagacttcaactggtaacaagctgagcgga
gaggaagctccgaagagggaggagctggaggcatggcttaaagagcatcctggatacgaa
gtgattgaagaagaaaactctgacgaagaaacagaggacgatgatgatgctattaaagcc
acaagccctacccccaccacaccaggtgctactgatattgatcctaatgatcctaccgcc
atcattgctaaggcgagtgctaacgctgacgatgagtactcatcaaaaacctccgataag
aactattactctattgctcacactttccgtgagtctattgagaagcaaccgacgctactt
cagtttgggacgttgaaggaatatcagattaaaggtttggagtggctggtgtctctgtac
aacaataatctcaatggtatattagctgatgagatgggactgggtaagactatacagaca
atagcactggtgacttacctcatggagaataaggggaacaatggaccttttcttatcatc
gtaccactatcaaccctctccaattgggatcttgagtttgatcgttgggccccatcagtc
gttcgtgtagtatggaagggacctccccttgtcagacgtagccttgcgaatcaaatcaag
tcagtccggtttaacgtgttgctgaccacctacgagtatgtgatgaaagacaagggtccg
ctatcaaagacaaaatggaagtacatgattattgacgagggacacagaatgaagaaccat
cactgcaaactgacgcagatattgaaccagtactacgaagcaccacacagactcttattg
actggtactcctctacagaacaatctccctgagttatgggctttgcttaatttcctcctt
ccaaccattttccagtcctgcaataactttgagcagtggtttaacgcaccttttgcaatg
acaggagaaaaggttgagctaaatgaagaggagaagattctaatcataagacgtcttcac
aaagttttgcggccatttttattgcgacgattaaagaaagaagttgaaaatcagctacca
gataaagttgagtatgttataaagtgtgatatgtcggcacttcagagacaaatgtatgtt
cacatgcaaaagaaaggtatcctgctaactgatggatctgaaaccaacaggaagggtaaa
ggaggtgctcgggccctcatgaataccattatgcagttgcgtaaaatctgtaaccatcct
ttcatgttcgaagagattgaagatgccatcttagagcaccagggactctcaggaaacact
cccaatgcctccattgctactacagctgatctttatagagcctcaggtaaatttgagctc
ttggataggatgctgccgaaatttaaggagacgggacatcgaatattactgttctgtcag
atgacacagttgatgactataatggaggattacctccaatggagaggatacttatacttg
cgtcttgatggtgctaccaaagctgatgatcgtggccaattgcttgaactcttcaatgct
cccaactcaccttacttcctgttcctactcagcaccagggcaggagggctgggtctcaac
cttcaagtggccgatactgtcatcatatttgattctgattggaatcctcatcaagatctc
caagctcaggacagagcccatcgtattggtcagaagaatgaagtccgagtcctgagactc
tgtacagtaaacagtgttgaagagaagattctagcagctgccaagtataaactgaacgtt
gacgagaaggtcattcaagctggaatgtttgatcagaaatcaaccggaagtgaaaggaag
gccttcctggtcgccatattggaggacgaacaggcggaggaggaggagcaagaggttgct
gatgacgaagctcttaatgacatgattgcaaggaatgaagaggaattggaattatttcag
aggatggatttggagagagctgcaagagaagctatggatcccagcctgcgtcataaacca
cgcctcattcaagaagatgagctgccatcttggttgctacgggatacagaggaggtggag
caaatggcctttgaagagaatgaggaacgtctttttggattagggaagagacagcgtaaa
gaggttgattattctgaagcactgacagagaagcaatgggtgaaggcactggaagatgga
acattagaggaggttgaagaaacaaaaaagaacagaaagaaaaggaagaggaaggatatt
gcattattaggagaagagacaaagagtaagaagaggaagaaagctactgctggtgtatca
gcaaagctaactcgtttattaattagtctatgggaagcagttgtagcttatcaggatagc
accaaccgaaggatcagcgaaatattcatggtccttcccaccaggagggaactccctgag
tactatcagattataaagaaacccattgatttaaagaagatcaaagataagatcatgaaa
cagaagtatcagtgtctctctgacatggaggatgatgtgatactgctctgtggtaatgct
aggacttataatgaagaaggatcgcagatatatactgattctatcgagcttgagagagta
ttcatggaagcaaaggcacaacttgatgtagatgaatatggaggagttgatagtgatgat
gaaagacaagtgtctgttgaagttgacgactataattctgatacatctgatgtgtcatta
aacaggcatcacagtggtagcagtatgtccaatactcccgccccctcagggggtggagct
tcagtcagtggatcattacctcccagtgtagcacgaagtactagtagcagtagtaaagcc
aggaggtctcgtaagggacgtcctaagaaacacgagagggtaccgttgattatagaatct
gataatgaggagagtgctccggtaactcctgagtttataactggttcacctgcttcctct
tatacttcatctcttgtgccgtctccggcttcatcttcaacctctttctctcgccggaaa
tattga
DBGET
integrated database retrieval system
