Amphimedon queenslandica (sponge): 100641505
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Entry
100641505 CDS
T02284
Name
(RefSeq) DNA mismatch repair protein Msh2-like
KO
K08735
DNA mismatch repair protein MSH2
Organism
aqu
Amphimedon queenslandica (sponge)
Pathway
aqu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aqu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
100641505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aqu03400
]
100641505
DNA repair and recombination proteins [BR:
aqu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
100641505
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
MutS_I
AAA_27
Motif
Other DBs
NCBI-GeneID:
100641505
NCBI-ProteinID:
XP_011403621
UniProt:
A0A1X7V197
LinkDB
All DBs
Position
Unknown
AA seq
906 aa
AA seq
DB search
MAEVAVDPYFTRFFRSMPEKPETTIRVFDRGDYYTAHGNDGLFVAKEVFGSTSVAKYYGS
EGNKVPSVSLSKLKFESFARDLLLVKKYRIEVYRNKVKSGNDWFPAYKASPGNLQQLEDI
IFNSNLQGDSCTAMAIRLSSKDGQRVVGVAFSDFSSQELKVCQFVENDNFANFESLLVQI
GPKECLLVAKDTNTEAGIMKKTLQKANILITERKRSDFNSKDIVQDLNRLLKTENCSSLP
ELELSLSMEALSAIIKYLELLSDERNFNSFSLSQFDMNRYMRLDTAASLALNVEAGQGEN
QAYSLLGVLNHTRSPQGQRLLRQWIKQPLTDLKHIVERQNLVELFVDTVTLRQSVQGRSL
KIIPDLFRLSKKLQQGKGTLQDCVIIYQAVQILPTLTDVLNSYNGNHESLLKEVFITPLE
ELADDFIKYREMIETTIDLDMIQHHEYLIKPSFDEELQKLRDNMSSIEEKMNVIYKKTAS
DLSLDVGKTLKLESNSHLGYYMRLSKKTEKLIRGQKRFIVLDARNEGVRFTVSPLKVLSE
EYQGLQRVYNQQQDKFAREVVQIASGYTGPILTFNDLTAHIDALTSLAEAATSSPLGYIR
PSITDKGTGNIVLTGARHPCLEKQDDISFIANDVSLLRGEDEFQIITGPNMGGKSTYIRM
IGVIVLMAQVGSFVPCTSANISIVDSILARVGAGDSQLKGVSTFMSEMLETATILKTATR
NSLIIIDELGRGTSTYDGFGLAWAISQHIATQIHCFCLFATHFHELTSLSDTVPTVSNRH
VTAITSSDNTLTLLYKVNKGVSDQSFGIQVAEMAHFPSEVISYARQKAAELELFYNKGEG
SIDEPTAKKRRTEIKEGEELIDSYLRRIDALSLETMTDSEITEELRSMREEILAQSNNSY
LVGIIS
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagtggcggttgatccttactttacaaggtttttccggtcaatgccagaaaaa
ccagagactacaatccgtgtttttgatcgtggagattattatacagctcatggtaatgat
ggactctttgtggctaaggaggtgtttggctcaacatctgttgctaaatattatggatca
gagggtaacaaagttccttcagtctcgctgagtaaattaaagtttgagtcgtttgctcgt
gacctcttgttagtgaaaaagtatcggattgaggtttatcgtaataaagtgaaatctggt
aatgattggttcccagcttacaaggcatctccaggcaatcttcaacagttggaagacatc
attttcaattccaatctccaaggcgactcttgtactgccatggctatacgactttcctca
aaagacggccagcgagtagtgggtgtggctttctctgactttagttcccaggagctgaag
gtctgtcagtttgttgaaaatgacaactttgcaaattttgagtcattgcttgttcaaatt
ggcccaaaagagtgcctgttggttgccaaggatacaaatactgaggccggtattatgaag
aagacactccaaaaagcaaacatattaataactgaaagaaagagatctgatttcaatagc
aaggacattgtgcaagatttgaatcgtttgctaaaaactgaaaattgttcttccctgcct
gaactggagttgtctttgtccatggaagcactctcggccattattaaatatttggaattg
ttgtctgacgagagaaactttaactcgtttagtctctcacagtttgacatgaaccgatac
atgagactggacacagctgcttcactggcactgaatgttgaggcaggccagggagagaac
caggcttatagcttgctaggtgtactcaaccacactcgctcacctcagggacaaagactt
ctcagacagtggatcaaacaacctcttactgacctcaaacatatcgttgaaagacagaat
cttgttgaattatttgtagatactgtcactcttagacagtcagttcaaggcagaagttta
aagattattcctgatcttttccgtctctctaagaagctccaacaaggaaaaggaacttta
caggattgtgtcatcatttatcaagcagtacaaatcctacccactctaactgatgtactc
aatagctataatggtaatcatgagtcgctactaaaagaagttttcattacaccattagag
gaattggctgatgattttatcaagtatcgtgagatgattgagacaacgattgatcttgac
atgatacagcatcacgagtatcttattaaaccttctttcgatgaagaactgcaaaagcta
cgtgataacatgagcagcattgaagagaagatgaacgtcatttataaaaagactgcatct
gatctgtctcttgatgttggtaagactttgaaacttgagagtaattcacatttaggatat
tacatgagattatcaaaaaagacagagaagttgatacgtggccagaagaggttcatagtt
ttggatgctcgtaatgaaggagtccggttcaccgtgtctcctcttaaggtcctcagtgaa
gagtaccaggggcttcagagagtctataaccagcaacaggacaaatttgctagagaagta
gtccagattgcaagtggatacacaggtcctattcttactttcaatgatctaacagcacac
attgatgcactgacaagtttggcagaggcagccacttctagtccgctgggttacataaga
ccctccattactgataaaggaaccggtaatattgtactcactggggcgagacatccttgc
cttgagaaacaagatgacatatccttcattgctaatgacgtgtccttattgagaggtgaa
gatgagtttcaaataatcactggacccaatatgggaggaaagtcaacatacattagaatg
attggtgttattgtactgatggctcaagttggcagttttgttccttgtacgtcggctaat
atcagtatagtcgattcaatactggctcgtgttggggccggggattcacagctaaagggc
gtgtctactttcatgtctgaaatgctagagactgcaactatactcaaaactgctactagg
aattctttgataattattgatgagcttggtagaggaacttcgacttatgatggatttggt
ttggcttgggcaatttcacagcacatagctacacagatacactgcttctgtctctttgca
actcattttcatgagctcacttcactctcagacactgtaccaactgtcagcaatcgtcat
gtaactgcaatcacttcttcagacaatacactcactttactttataaagtcaacaaaggt
gtttctgatcaaagttttggtattcaagtggctgaaatggctcactttcccagtgaagtt
ataagctatgcacgtcaaaaagctgcagaattggagcttttctataacaagggtgaagga
tctattgatgaaccaactgcaaagaagaggagaacagaaattaaagaaggagaagaattg
attgatagctatttgaggaggattgatgctctatcattagagacaatgacagatagcgaa
ataacagaagagctcagatcaatgagggaagaaatactagctcagtcaaataattcttat
ttagtcggaataataagctga
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