Amphimedon queenslandica (sponge): 100641788 Help Entry 100641788         CDS       T02284                                  Name (RefSeq) DNA ligase 1-like   KO K10747   DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] Organism aqu  Amphimedon queenslandica (sponge) Pathway aqu03030   DNA replication aqu03410   Base excision repair aqu03420   Nucleotide excision repair aqu03430   Mismatch repair Brite KEGG Orthology (KO) [BR:aqu00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     100641788    03410 Base excision repair     100641788    03420 Nucleotide excision repair     100641788    03430 Mismatch repair     100641788  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:aqu03032]     100641788    03400 DNA repair and recombination proteins [BR:aqu03400]     100641788 Enzymes [BR:aqu01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      100641788     6.5.1.6  DNA ligase (ATP or NAD+)      100641788     6.5.1.7  DNA ligase (ATP, ADP or GTP)      100641788 DNA replication proteins [BR:aqu03032]  Eukaryotic type   DNA Replication Elongation Factors    Other elongation factors     100641788  Prokaryotic type    Elongation factors (archaeal)     Other elongation factors      100641788 DNA repair and recombination proteins [BR:aqu03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Long Patch-BER factors      100641788    NER (nucleotide excision repair)     Other NER factors      100641788    MMR (mismatch excision repair)     Other MMR factors      100641788 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C FERM_N_2 Motif Other DBs NCBI-GeneID:  100641788 NCBI-ProteinID:  XP_003382914 UniProt:  A0A1X7VUF4 LinkDB All DBs Position Unknown AA seq 862 aa AA seqDB search MSLLNFFSKVTQEKGKRKRETKNDDLGEEHNIIKNDEREKKRVEEEEEEEDVIRRCKRPR QAVIESDSDGELETKDGSRQEEMETNSVPSLPVKTNSTSSVTKTPPKRATARKHTGRVTA AAKTIIKKKDTQEDPVIKPKSQADDVKDVVVSEETKEAKEESCPVSECEKIEKSSSLAED KENNSVSAGEKKESFAKKTSTSSSFDPTKINYHPVKDACWTKNQKVPYLAIAKTFQQIEQ ISGRLKIISILTNFLRSVIALSPRETTQCIYLCLNKLGPAYKGLELGIGDNILIKALSSA TGRNPQQIKAEVAEKGDLGLIAEASRSTQRTMFAPPPLTISSVFNKFTEIAKLTGHSSQN KKVDIIKSLIVSCKDCEAKYLTRSLSGKLRIGLAEQSVLVALAHAVKYTPPGQDIADASQ GVNGEKFRKELDAAAAIVKNAYCELPNYDILIPALLEHGLDELPNHCSLTPGIPLKPMLA HPTKGIQEVLRRFEQSEFTCEWKYDGERAQIHLLDDNTVQIYSRNQEDNTSKYPDIIARI PQVLKTAGEGEEGEREGVKSCVIDAEAVAWDIEKKQILPFQTLSTRKRKDANISEIKVQV CVFAFDLLFLNGRPLVREPFRVRRELLKSSFKEIEGEFMFVQSIDSTNIEDIQSFMDESM KGNCEGLMVKCLDKDASYEIAKRSRNWLKLKKDYLEGVGDTLDLVVVGGFHGTGKRTGKY GGFLLACYDEENEEYQVICKIGTGFKDEELEQHTSYLKDHVIDGPKSYYSTSDSITPDHW FEPVQVWEVKAADLSVSPVYPAAAGIIDPEKGISLRFPRFLRIREDKKPEQATTNQQVAI LYRQQQNIVKQTETNEDIDDLY NT seq 2589 nt NT seq  +upstreamnt  +downstreamnt atgtcactgctgaatttctttagcaaagtcactcaagaaaaaggcaaaaggaaacgtgag accaaaaatgatgatttaggggaggaacataatattattaagaatgatgagagggagaaa aagagggtggaagaggaggaggaggaggaggatgttatccgacgttgtaagagaccccgt caagcagtgatagagagtgacagtgatggagagttggagacaaaagatggaagcagacaa gaagagatggaaacgaatagtgtaccatcattgcctgtgaaaactaatagtactagtagt gtcaccaaaacacctccaaagagagccacagctcgaaaacacactggaagagtaacggca gctgcaaaaacaataatcaagaagaaagacactcaggaggatcctgttatcaaaccaaag tctcaggctgatgatgtgaaagatgtagttgtgtctgaagagactaaagaagctaaagaa gaaagttgtcctgtttctgaatgcgaaaaaattgaaaaatcaagttcacttgcagaagat aaagagaataacagtgtgtctgctggtgaaaaaaaagaaagctttgcaaaaaagacttca accagctcttcttttgatcccacaaagataaactatcatcctgtaaaagatgcttgctgg acaaaaaatcaaaaagttccctatcttgctattgctaaaacatttcaacagattgagcaa atatcaggaagattgaagataatcagtattttaactaattttttacgatcagtaatagct ctttctcctcgggaaacaacgcaatgcatttacttgtgcctcaacaagctggggccagct tataaaggccttgaacttggtattggtgacaatattctgattaaagctttgtcaagtgct accggtcgaaatccgcagcagatcaaagctgaagtggcagagaaaggtgacctaggttta atagcagaagcaagcagatcaacacaacggactatgtttgctccgcctcctcttaccatt agtagcgtatttaataaatttacagagatagctaaactgaccgggcattcttctcagaat aagaaagttgacataattaaaagtctgatagtcagttgtaaagattgcgaggctaaatat ttaacaagatcactaagtggtaagctacggatcggtttagcggaacaatcagttctagtt gctcttgctcatgctgtcaaatacacaccacctggacaagatattgctgatgccagtcag ggggtcaatggagagaagtttcgtaaagagctggatgcagcagctgctattgtcaagaat gcttactgtgaattgccaaactatgatatcttgatacctgctctacttgagcatgggctg gatgagctgcccaatcactgctccctgactccggggataccactaaaaccaatgctagct caccccactaaaggcatacaagaggtactcagacgatttgagcagtccgagtttacatgt gaatggaagtatgatggtgaaagggcccagattcatttattggatgacaacactgttcag atatacagtcgcaaccaagaggacaatacttctaagtatccggacatcatagcaaggatt ccacaggtgttgaagactgctggagagggagaggaaggagagagagagggagtgaagtct tgtgtgattgacgctgaagctgttgcgtgggatatcgagaagaaacaaatacttcctttc caaactctgagcactagaaaaagaaaagatgcaaatatttctgagattaaagtccaagtc tgcgtctttgcctttgacctgttatttcttaatgggagacctttagttagggaacctttt agagttaggcgagagctattgaagtcttcattcaaagagattgaaggggagtttatgttt gttcaaagtattgattctactaatattgaagacattcagagctttatggatgaatcaatg aaaggtaattgtgaaggcttaatggtcaagtgtcttgataaagatgcatcatatgaaata gcaaagagatcccgcaactggctaaaacttaagaaggattatcttgagggtgtgggcgac acactagatctcgttgtggttggtgggtttcatggaacgggaaagagaacaggaaagtat ggcgggtttctactggcttgctatgacgaggaaaacgaagaatatcaagtcatttgtaaa attggtactggtttcaaagatgaggagttagaacagcacacttcatatcttaaagatcac gtcatcgatggacctaaatcatactacagcactagtgatagcattacccctgaccactgg tttgagcctgtccaagtctgggaagtaaaggcggctgatctctctgtgtctcctgtttat ccagctgctgctggaattattgatccagagaaaggcatttcacttcgtttccctcgtttt cttcgtataagagaagacaagaaaccagagcaagccactaccaatcaacaggtagcaatt ctttatcgtcagcagcagaacattgtcaagcaaacagagactaacgaagatatagatgat ctctactaa

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