Amphimedon queenslandica (sponge): 100642141
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Entry
100642141 CDS
T02284
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
aqu
Amphimedon queenslandica (sponge)
Pathway
aqu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aqu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100642141
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aqu03019
]
100642141
Messenger RNA biogenesis [BR:
aqu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100642141
mRNA degradation factors
5'-3' decay
Lsm complex
100642141
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
100642141
NCBI-ProteinID:
XP_003386543
UniProt:
A0A1X7UXZ2
LinkDB
All DBs
Position
Unknown
AA seq
151 aa
AA seq
DB search
MEGHGVQTDLQAKDSFDGKYIPGTASLIAEVDKRILVVLRGGRTLIGYLRSIDQFANLLL
QDTVERIHVGKKYGDIPRGIFLVRGENMVLCGEIEKSLEESMELEKVSIEEIIEAQRQEN
EKREKEKKRKEELLRQKGLPVVRDESEDILS
NT seq
456 nt
NT seq
+upstream
nt +downstream
nt
atggaagggcatggggttcagacagatcttcaagcaaaagacagttttgatggtaaatac
ataccaggaacagccagtcttatagcagaagtcgacaagcgtatattggttgtattaaga
ggagggaggacattgataggatacctcagaagtattgatcaatttgcgaatctgttgtta
caagacactgttgagcgcattcatgtcggaaagaaatacggagacatacctagaggaata
tttctagtcagaggagaaaacatggtcctctgcggagaaatagagaaatcacttgaagaa
agcatggaactggagaaggtctcgattgaggagattattgaggcacagagacaagaaaac
gagaagagggagaaagagaagaagagaaaagaggagctattacgacagaagggacttccc
gtcgtgagagatgaatctgaagatattctgtcatga
DBGET
integrated database retrieval system
