Amphimedon queenslandica (sponge): 105311947
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Entry
105311947 CDS
T02284
Name
(RefSeq) exosome complex component MTR3-like
KO
K12587
exosome complex component MTR3
Organism
aqu
Amphimedon queenslandica (sponge)
Pathway
aqu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aqu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105311947
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aqu03019
]
105311947
Messenger RNA biogenesis [BR:
aqu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
105311947
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
DUF1797
Motif
Other DBs
NCBI-GeneID:
105311947
NCBI-ProteinID:
XP_019849547
UniProt:
A0A1X7VCL1
LinkDB
All DBs
Position
Unknown
AA seq
267 aa
AA seq
DB search
MAGAGSGRRNRYLAPEATRNPLLCLKEKKEDNSILRSNQLRQDGRSCTDIRPVSIQSGIV
SHVTSSAYIELGDTKVLCSILGPRHTQKDFNLEGQVLCQVKFAPFSCHFQKPSQQEEKFM
SSIISEAIVGAIRTETFPKLETLVNIVVLENDGSMLTAAILCASIALATSGIEMKDLPTA
CTVSYSDKASNIYYDPTIAEEYSTANENKDVIGYKSVVYLPLLREISGVYQVGVAESHSV
SSQLLEACIEGGLRYHERVRQYLKDLA
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atggctggagctggaagtggaagaagaaacaggtatcttgctccagaagcaaccaggaat
cctttgttatgtttaaaggaaaagaaagaagataactcaatactcagatctaatcagtta
cgtcaagatggaaggtcatgtacagatatccgtccagtttcaattcaatctggcattgta
agccacgtgactagctccgcctacattgagcttggcgatactaaagtgctttgttctata
cttggtccgagacacacacaaaaagattttaacttagagggtcaagtcttatgtcaagta
aaatttgctcctttttcttgtcattttcaaaaaccgtcacagcaggaagagaaatttatg
tcctcgatcataagcgaagcaattgttggagccattaggaccgaaacgtttccaaaactt
gaaacactggttaacatagtcgtacttgagaatgatggcagcatgctcacagcggccatt
ttgtgtgcatctattgccttggcaacaagtggtattgaaatgaaggatcttcctacagca
tgcactgtgtcttacagtgataaagctagcaacatttactatgacccaacaattgccgaa
gaatatagtactgctaatgagaacaaagatgtcatcggatataaatctgttgtatatctg
ccattgttaagggaaataagtggagtttatcaagtgggtgtggcagagtctcattcggtt
tcctcccagttgttggaggcctgtattgaaggaggtctaagatatcacgaaagagtaaga
caatatttgaaggatttagcataa
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