KEGG   Amphimedon queenslandica (sponge): 105312296
Entry
105312296         CDS       T02284                                 
Name
(RefSeq) cullin-4A-like
  KO
K10609  cullin 4
Organism
aqu  Amphimedon queenslandica (sponge)
Pathway
aqu03420  Nucleotide excision repair
aqu04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:aqu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    105312296
  09124 Replication and repair
   03420 Nucleotide excision repair
    105312296
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:aqu04121]
    105312296
   03400 DNA repair and recombination proteins [BR:aqu03400]
    105312296
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:aqu04147]
    105312296
Ubiquitin system [BR:aqu04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul4 complex
    Cullin
     105312296
DNA repair and recombination proteins [BR:aqu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      105312296
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      105312296
Exosome [BR:aqu04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   105312296
SSDB
Motif
Pfam: Cullin Cullin_Nedd8
Other DBs
NCBI-GeneID: 105312296
NCBI-ProteinID: XP_019850141
LinkDB
Position
Unknown
AA seq 822 aa
MSHSSTTNGVTTASSSNIQDTPSSSADTQRVQRRKRRRRRESSVTTPPPSKQQKINFPLS
SNNHHQHNNHHKTSITTEEVHDMDSRASPNRSVSAPVESNHKISLHGHATRGGGGVANGM
KKSGTPKKIVIKNLKARADVQPMEYCKEAWSKLKKAIEAIHSSQPICYSLEELYLAVENS
CSHGLAPELYGNLKTECQEHMSVHLPEFNQDNVDEGSYMIIIDRVWVSFCRQMIMIRSIF
LYLDRTFAVPHQTLPAIWEMALEQFGDVVSQPKIRDRILRGILAAIHRERCGESADRTLL
KSLLRMFVDLQLYQGVFELEFLKETEKLYYNESLRMMRDSEFTLPDYLSHIDKRLSQEND
RLIQYLHKTTKKPLILCVEKQLVGEHLQEILDKGFESLLEANRYHELILLYQFFGRFKDG
IPLLHIAFGGYIKKSGIAIVSDQERDKQMVQELLELKDKVEKIIQESFQNENKFHQVVRD
SFENVINRRQNKPAELVAKYVDTQLRSGNKEWSDEELDRLLDRVMVLFRYIHGKDVFEAF
YKKDLAKRLLLGKSASFDAEKSMLLKLKQECGPNFTSKLEGMFKDIELSREMMSSFKQHI
STTKRVSGSIDLSVNVLTMGYWPTYTPMEVLLPPEMGFYLDVFKDFYVRKHSGRKLQWQH
SLANCVLRVSFDQADKELQVSLFQGLVLLLYNDTDQLTYSYISQATGIIEEELKRTLQSL
ALNKVSRILLKQPKSFEVNDTDVFTFNRSFKHKLFRIKINQIQMKETQSENIATSERVFQ
DRQYQVKALVHASDLKKRIESLIERDYIRRNEENTGIYEYIA
NT seq 2469 nt   +upstreamnt  +downstreamnt
atgtctcatagctctaccactaacggggtaaccactgcctcatcatcaaacattcaagat
actccatcatcatcagctgatacccagagagtccagagaaggaaaaggagacgtcgtcgc
gagagcagtgtgaccacacctccacccagcaagcaacagaaaatcaatttccccttgtcc
tctaacaatcatcaccaacacaataaccatcacaagactagcataacaactgaagaggta
catgatatggactctagggcatctcccaatcgctccgtgagtgctcctgttgagtccaac
cacaagatatcgctacacggtcatgcgacccgaggtggtgggggcgtggccaatggaatg
aaaaagtcgggcactccgaaaaagattgtcataaaaaatcttaaagctcgagctgatgtt
cagcctatggaatattgcaaggaagcttggtccaaattaaagaaggccattgaagctatt
cactccagccagccgatatgctatagcctggaggaactgtatttagcagtggaaaactcc
tgctctcacgggctagcccctgaactgtacgggaatcttaagacagagtgtcaggaacac
atgtctgtacatttaccggaatttaatcaggataatgttgatgaaggctcgtatatgatt
attattgacagagtctgggtctcattctgtcgtcaaatgataatgatacggagtatattt
ttatatcttgacagaacttttgctgttcctcatcaaactcttcctgctatctgggagatg
gctcttgaacagtttggtgatgttgttagccagccaaagatcagggaccgtatccttaga
ggcatactggcagccattcacagagaaagatgtggggagagtgctgatcgcaccctattg
aaaagtttattaagaatgtttgttgatttacagctttatcaaggtgtctttgagttggaa
ttcctaaaggagacagagaaactttattataacgagtcacttagaatgatgcgagattct
gagttcactttacctgattatttgagtcatattgataaacgtctctctcaagagaatgac
aggctcattcagtatcttcataaaacaacaaagaagccattaatcctgtgtgttgaaaag
caattggtcggagaacacttgcaagaaattttagacaaaggatttgagagcttgcttgaa
gccaacagatatcatgagcttatccttctctatcagttctttggacgattcaaggatgga
ataccattgcttcatatagcatttggaggatatattaagaaatcagggattgctatagta
agcgatcaggagagagataagcaaatggtgcaggaactgttggagctaaaagacaaagtt
gagaaaatcattcaagaatcgtttcagaatgaaaataaattccatcaagttgttagagac
tcttttgagaacgtcatcaacaggaggcagaataaaccagctgaacttgtggcaaagtat
gttgatacacaactgagatctggtaataaggaatggtctgatgaggagcttgatagatta
ttagacagagtgatggttctcttcagatacatacacgggaaagatgtttttgaagcattt
tataagaaggatttggcaaagcgtcttctattaggaaagagtgcatcctttgatgcagag
aaatctatgctcttgaaactaaaacaagagtgtggacccaatttcacaagtaaacttgaa
ggaatgtttaaagacattgagttatcgagagaaatgatgtcaagctttaaacaacatata
tcaactaccaagagagtctctggatctattgatttatctgttaatgtcttaactatggga
tactggcctacatacacaccaatggaagttctactaccaccagaaatgggtttttatctt
gatgtatttaaagatttctatgtacgcaagcacagtggaaggaagctccaatggcagcac
tcgttagctaattgtgtactaagagtctcctttgatcaggctgataaagaattgcaagtg
tctttatttcaagggctagtccttctcttgtataatgacactgaccagctaacatattct
tacattagtcaagcaacaggaataattgaagaagaacttaaaagaactctacagtcatta
gctcttaataaagtatcaagaattttattgaagcagccaaagagttttgaagtaaatgat
acagatgtctttacatttaatcgatcattcaagcacaagctattccgtattaaaattaat
caaattcaaatgaaagaaactcaatctgaaaacatagcaaccagcgagagggtttttcaa
gatagacagtaccaggtaaaggcacttgtacatgcctcagatctaaagaagaggatagag
agtctaatagaacgtgattacataagaaggaatgaagagaatactggtatatacgagtat
attgcttaa

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