Amphimedon queenslandica (sponge): 105313379
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Entry
105313379 CDS
T02284
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit-like
KO
K07466
replication factor A1
Organism
aqu
Amphimedon queenslandica (sponge)
Pathway
aqu03030
DNA replication
aqu03420
Nucleotide excision repair
aqu03430
Mismatch repair
aqu03440
Homologous recombination
aqu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
aqu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
105313379
03420 Nucleotide excision repair
105313379
03430 Mismatch repair
105313379
03440 Homologous recombination
105313379
03460 Fanconi anemia pathway
105313379
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aqu03000
]
105313379
03032 DNA replication proteins [BR:
aqu03032
]
105313379
03400 DNA repair and recombination proteins [BR:
aqu03400
]
105313379
Transcription factors [BR:
aqu03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
105313379
DNA replication proteins [BR:
aqu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
105313379
DNA repair and recombination proteins [BR:
aqu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
105313379
MMR (mismatch excision repair)
105313379
DSBR (double strand breaks repair)
HR (homologous recombination)
105313379
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep-A_N
REPA_OB_2
tRNA_anti-codon
DUF223
Rep_fac-A_C
Motif
Other DBs
NCBI-GeneID:
105313379
NCBI-ProteinID:
XP_011405062
UniProt:
A0A1X7UGX3
LinkDB
All DBs
Position
Unknown
AA seq
381 aa
AA seq
DB search
MAQFDVSLLSGGAIKASMEGQAPPSPRLQILGIKGFTNDSRGGGAQKYRIQVSDGIHCGA
GMLATQLNEKITSNEISKYCIVRVDKMLINSIGAKKVMIFIKLTVLYSAQDVGGMLGTPR
QLNSDSADSNSTTPTVKDEPLARPPLAQRSQVGVAPAPVAPQPIQTPPRFYGNSAQRTGG
MGGASNLMQSPGGGTKNVVPITALNPYQNKWTIKARVTSKPPLRHYNNSRGEGRILTLEF
VDHSGEIRATAFNEDADRFFPNVEVNKVYYVSRGRIKPANKIYYANNDYELTLGAETTIE
ECFDDVSDMPSTASFNFTSIGDLESKPKDSIIDVIGVCVSAAELGSVTVRSSNKKVSKRD
ITLVDRSGRSIICTIWGTSVR
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atggcccaatttgatgtctctctcttatccggcggtgctattaaagcttcaatggaagga
caggctcctccaagccctcgattacagattctgggtattaaaggttttacaaatgattct
cgtggaggcggagcccaaaagtatcgaatacaagtatcagatggtattcattgtggagca
ggaatgttggctactcagttaaatgagaagatcacttcaaacgagatcagcaaatattgc
attgttcgtgttgacaagatgctgataaattccattggtgccaaaaaagtaatgatattc
attaaactcactgtgctgtacagtgctcaagatgttggtgggatgttaggaactcctcgt
cagcttaactccgacagtgctgactctaattccactactccaactgtcaaagacgagcct
ttagcccgccctcctcttgctcaacgctcacaagtgggtgtggcaccagcaccagttgcg
cctcagccgattcagactccgcctagattttatggtaactcggctcaaaggacaggagga
atgggaggggccagtaatttaatgcagtcacctgggggtggtactaagaatgttgtgcct
ataactgcattgaatccataccagaataagtggacgataaaggcgcgggtcacttcaaaa
cctcctctaagacattataataattctcgtggagaaggtcgtattttgacgctagagttt
gttgaccattctggtgagatcagggctacagcattcaatgaagacgctgatcgtttcttt
ccaaatgttgaagtgaacaaggtttattacgtgtcgagaggtcgtatcaaaccagccaat
aaaatatattatgctaacaatgattatgaattgacgcttggagctgagacaaccattgaa
gagtgttttgatgatgttagtgacatgccttcaactgcctcttttaatttcacgtcaatt
ggagacttggaatccaaacctaaggacagcattattgatgtcattggtgtgtgtgtttct
gctgctgagttgggttcagtgactgtccgttccagtaataaaaaggtatcaaagagagac
attactttagttgatagaagtggacgaagcatcatatgcacaatttggggaacatcagta
agatga
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integrated database retrieval system
