KEGG   Amphimedon queenslandica (sponge): 105315276
Entry
105315276         CDS       T02284                                 
Name
(RefSeq) THO complex subunit 6 homolog
  KO
K13175  THO complex subunit 6
Organism
aqu  Amphimedon queenslandica (sponge)
Pathway
aqu03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:aqu00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    105315276
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aqu03019]
    105315276
   03041 Spliceosome [BR:aqu03041]
    105315276
Messenger RNA biogenesis [BR:aqu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     105315276
Spliceosome [BR:aqu03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    105315276
SSDB
Motif
Pfam: WD40 WD40_Prp19 Beta-prop_EML_2 WD40_WDHD1_1st WD40_CDC20-Fz WDR55 Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd EIF3I Beta-prop_WDR75_1st WDR90_beta-prop_4th Beta-prop_TEP1_C Beta-prop_IFT122_1st HCV_NS4a Beta-prop_EIPR1 Beta-prop_SPT8
Other DBs
NCBI-GeneID: 105315276
NCBI-ProteinID: XP_011408162
UniProt: A0AAN0IRU1
LinkDB
Position
Unknown
AA seq 332 aa
MDLTSLEKFYTFIYDLHFSSCGKFLACCDNYGYITLFSVVKALEPSAAGATQKHINKWRG
DKSSLYCLSSSTEYLFSGGTEGVRFWHWNNITKPNSSSTELEKPFCHVTLPCSPLNDFHD
VNDLVYDEKNNNLYVACGWNVYCLDCTKALVKDIYSGHTKYIHSVCLRPGTNQFVTGSED
GSVKIWDPTASKEAVNTIKRKGGNKDAWISSVAIDSSGEWMVVGGLTPPTLYKMGSLSRI
VEFDVPKNVSTTVLKFAAGQILSAGSESVVRHWKVNGEAVRSVPVSSTISHVLSIAHNTG
GSSQHEVLAVSGDSPNIDIFTHLGYKAFTLSL
NT seq 999 nt   +upstreamnt  +downstreamnt
atggatcttacaagtttagaaaagttttatactttcatttacgaccttcatttctcgtct
tgtggtaaattcctggcctgctgtgacaattacggatacatcactctctttagcgtcgtt
aaagctctagaaccttcagcagcaggcgcaacacaaaaacacattaataaatggagaggt
gataaatcgtctctatattgtctgtcttcaagtacagagtatttgtttagtggtggaact
gaaggcgttaggttttggcattggaacaatataactaaaccaaactcttcttccacagaa
ttagagaagcctttttgtcatgtgacgcttccttgttcacctttaaatgattttcatgat
gtcaacgaccttgtttatgatgaaaagaataataatttatatgttgcctgtggctggaat
gtgtattgcttggactgtactaaagcactcgttaaagatatctacagtgggcataccaag
tacatacatagtgtgtgtctcagacccggcacaaaccaatttgttactgggtctgaagat
ggttctgttaaaatttgggaccctacggcttctaaggaagcagttaatactattaaaaga
aagggtggtaataaagatgcatggattagttcagtagccattgacagttcaggagaatgg
atggtggtgggtgggttgactcctcccaccttatacaagatgggatctctgagtcgaata
gttgaatttgatgtaccaaagaatgtcagtactactgttttgaaatttgcagctggacag
atattgagtgctggctcagagagtgtggtccgccattggaaggttaatggtgaagctgtc
agaagtgtcccagtcagtagcaccatatctcatgttctctcaatcgctcataatacagga
gggtcttcgcaacatgaggtgcttgcagttagtggagattcaccaaacattgacattttc
acacatttaggatacaaagcattcactctttccttatag

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