Aquihabitans sp. G128: KSP35_00905
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Entry
KSP35_00905 CDS
T07304
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
aqz
Aquihabitans sp. G128
Pathway
aqz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aqz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KSP35_00905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aqz03019
]
KSP35_00905
03400 DNA repair and recombination proteins [BR:
aqz03400
]
KSP35_00905
Enzymes [BR:
aqz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KSP35_00905
Messenger RNA biogenesis [BR:
aqz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KSP35_00905
DNA repair and recombination proteins [BR:
aqz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KSP35_00905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
RecQ_Zn_bind
MarR_2
TrmB
MarR
Pribosyltran
Motif
Other DBs
NCBI-ProteinID:
QXC61442
UniProt:
A0A8F4FT43
LinkDB
All DBs
Position
205631..207736
Genome browser
AA seq
701 aa
AA seq
DB search
MTATEPTPLAPPSPEVAEGAQAVLAELAGPDAVLRPDQLAAIDALVTHHQRVLLVQATGW
GKSAVYWIATRLQRAQGAGPTLVVSPLLALMRNQVAAARKAGIRAATINSANIDDWRHIE
DQIRADEIDVLLISPERLNNPGFRRDVLPSLAASVGLLVIDEAHCISDWGHDFRPDYRRI
ADVLAGLAPDVPVLAATATANQRVEADVAGQIGAATLTFRGSLDRPTLYLAVADVPTAPE
QLAWLESWTAAHGGPGLVYCLTVSEAERVAGHLRDHGLAAASYTGSTPADERERIEAGLD
DGSLACVVATSALGMGYDNPNLSYVVHLGSPSSPIAYYQQVGRAGRGKAEARVVLVPTRT
EVDIWEYFASTAMPPREVVEEVLSCLAREGPSTVMELESMVNLRRGRLEALLKVLDVEGA
VDRERSTWSATGSGWTYDEERYRQLAASRKAEQEAMKAYQRTSGCRLRFLRDELDDPAAE
DCGRCDNCTGERADQSLDADAVTRAQQFLRGAVVPVDPRKQWPKGLDGRRGNIKPELRAE
EGRALAFGNDPGWSEVVAGLFAGPDAAPTEELVRGVAATLKAWPWAQRPTWVTWVPSRTR
PLLVEGLAAELARMGKMELVEAVARQREAPPQARMENSATQAANVVDAFRFGRADGQALP
SGPGLVVDDALRSGWTMAVVAEGLRAAGSGPVLPLVLWRRP
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccaccgaacccacgccgctggcccctccgtcgcccgaggtcgccgaaggtgcc
caggcggtgctggccgagctggccgggcccgatgcggtgctgcggcccgatcagctggcc
gccatcgacgccctggtcacccaccaccagcgggtgctgctggtgcaggccaccggttgg
ggcaagtcggccgtctactggatcgccacccgcctgcagcgggcccagggcgccgggccc
acgctggtggtgtcgccgctgctggcgctcatgcgcaaccaggtggccgcggcccgcaag
gccgggatccgggccgccaccatcaactccgccaacatcgacgactggcgccacatcgag
gaccagatccgcgccgacgagatcgacgtgctcctcatctcgccggagcggctcaacaac
ccgggcttccggcgagacgtcctgccgtcgctggcggccagcgtcggcctgctggtgatc
gacgaggcccactgcatctcggactggggccacgacttccgccccgactaccgccgcatc
gccgacgtcctggccggcctcgcccccgacgtgccggtcctggccgccaccgccaccgcc
aaccagcgggtggaggccgacgtggccggccagatcggggccgccaccctcaccttccgc
ggctcgctggaccggcccaccctgtacctggcggtggccgacgtgcccaccgcccccgag
cagctggcctggctggagtcgtggaccgccgcccacggcggccccggtctcgtctactgc
ctcacggtgtccgaggccgagcgggtggcgggccacctgcgcgaccacggcctggccgcc
gcgtcctacaccggctcgacgccggccgacgagcgcgagcggatcgaggccgggctggac
gacggctcgctggcctgcgtggtcgccacctcggcgctgggcatgggctacgacaacccc
aacctgtcctacgtcgtccacctcggctcgccgtcgtcgccgatcgcctactaccagcag
gtcggtcgagcggggcggggcaaggccgaggcccgggtggtgctggtgcccacccgcacc
gaggtcgacatctgggagtacttcgcctccaccgccatgccgccccgcgaggtggtcgag
gaggtcttgtcctgcctggctcgtgaagggcccagcaccgtcatggagctggagtccatg
gtcaacctgcgccggggccggctggaggcgctgctcaaggtgctcgacgtggagggggcg
gtggaccgcgagcggtcgacctggtcggccaccggctcgggctggacctacgacgaggag
cgctaccgccagctggccgcctcccggaaggccgagcaggaggccatgaaggcctaccag
cgcacgtccggctgccggttgcgcttcctgcgcgacgagctcgacgatccggcggcggag
gactgcggccggtgcgacaactgcaccggcgagcgcgccgaccagtcgctcgacgccgat
gcggtcacccgggcccagcagttcctgcgcggcgcggtggtgcccgtcgatccccgcaag
cagtggcccaaggggctcgacgggcgccggggcaacatcaagccggagctgcgggccgag
gagggacgagcgctggccttcggcaacgaccccggctggtccgaggtggtggccgggctc
ttcgccgggcccgacgccgccccgaccgaggagctggtgcggggcgtggccgccaccctc
aaggcctggccgtgggcccagcggcccacgtgggtcacctgggtgccgtcgcgcacccgg
ccgctgctggtcgaggggctggccgccgagctggcccggatggggaagatggagctggtc
gaggcggtggcccgccagcgcgaggccccgccccaggcccgcatggagaactccgccacc
caggccgccaacgtggtcgatgccttccgcttcggccgcgccgacggccaggccctgccc
agcggccccggcctggtggtcgacgacgccctccggtccggctggaccatggccgtggtg
gccgagggcctgcgcgccgccggctcgggcccggtcctgcccctggtcctctggcgccgt
ccctga
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