Aquihabitans sp. G128: KSP35_03740
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Entry
KSP35_03740 CDS
T07304
Name
(GenBank) DEAD/DEAH box helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
aqz
Aquihabitans sp. G128
Brite
KEGG Orthology (KO) [BR:
aqz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aqz03019
]
KSP35_03740
Enzymes [BR:
aqz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
KSP35_03740
Messenger RNA biogenesis [BR:
aqz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
KSP35_03740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
ResIII
DEXQc_Suv3
Helicase_C
AAA_22
AAA_16
nSTAND3
IstB_IS21
MTR4-like_stalk
UvrD-helicase
Mg_chelatase
AAA_19
ATPase_2
AAA_25
AAA_7
Motif
Other DBs
NCBI-ProteinID:
QXC61941
UniProt:
A0A8F4FSC5
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All DBs
Position
803474..805189
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AA seq
571 aa
AA seq
DB search
MTDDAFTLDRFQLEAIAAIDAGHNVLVAAPTGSGKTVVAEHAVARALAEGRRAFYTTPIK
ALSNQKYADLVRRHGADRVGLLTGDNAVNPDAGVVVMTTEVLRNMIYAGSAALDDLAWVV
LDEVHYLQDTYRGPVWEEVIVHAPTEVRFVCLSATVSNADELAGWIAAARGHTETVVEHE
RPVELVNHYLVYEKASGDLVQLPTLVGGRPNPEGDRFDAPAMDGPKHLRYKQRGRSLWGS
PRRGEVIEHLAGSDLLPAIYFIFSRAACDDAARSVLELGLRLTTHTERLRIRAIAEHHVA
HLGAEDLAVLGYDRWLAGLEAGVAAHHAGMVPPFKEAVEACFVEGLVKAVFATETLALGI
NMPARSVVVETLSKFTGETHEDLTPSQYTQLTGRAGRRGLDPVGHALVLWSPWYGFDKVA
ALAASREFVLRSAFRPTYNMVVNLVRRYDRDQAHELLGRSFAQFQADRSLGKLAHRRASR
QALLAEAEAAATCERGDVDEYRTLRRGERRAARGPEPARGPHHRCGGTARAGRRDPLRHP
PAGGPVGVVPQGGHPPPGDRPRRPRVGARPR
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacgacgccttcacgctcgaccggttccagctcgaggccatcgccgccatcgac
gcggggcacaacgtcctggtcgccgccccgacgggctcgggcaagacggtcgtggctgag
cacgcggtggcccgggcgctggccgaggggcgccgggcgttctacaccacgcccatcaag
gccctgtcgaaccagaagtacgccgacctggtgcggcgccacggcgccgaccgggtgggc
ctgctcaccggcgacaacgcggtgaaccccgacgcgggggtggtggtgatgaccaccgag
gtcctgcgcaacatgatctacgccggctcggccgccctcgacgacctggcctgggtggtg
ctcgacgaggtccactacctccaggacacctaccgcggtccggtgtgggaggaggtcatc
gtccacgccccgaccgaggtgcgcttcgtgtgcctgtcggccacggtgtcgaacgccgat
gagctagccggctggatcgcggcggcgcggggccacaccgagacggtggtcgagcacgag
cggccggtggagctggtgaaccactacctcgtctacgagaaggcctcgggggacctggtg
cagctgcccaccctggtgggcggtcgacccaaccccgaaggcgaccgcttcgacgccccg
gccatggacggcccgaagcacctgcgctacaagcagcgcggccgctccctctggggttcg
ccgcggcgcggcgaggtcatcgagcacctggcgggcagcgacctcctgccggcgatctac
ttcatcttcagccgcgccgcgtgcgacgacgcggcgcggtcggtgctcgagctggggctg
cgcctcaccacccacaccgagcggctccggatccgggccatcgccgagcaccacgtggcc
cacctcggcgccgaggacctggcggtgctgggctacgaccgctggctcgccggcctggag
gccggggtggccgcccaccacgccgggatggtgccgccgttcaaggaggccgtcgaggcc
tgcttcgtggagggcctcgtgaaggcggtgttcgccaccgagacgctggcgctcggcatc
aacatgccggcccggtcggtggtggtcgagacgctgtcgaagttcaccggcgagacccac
gaggacctcacgccgtcgcagtacacgcagctcaccggccgggccgggcggcgggggctc
gacccggtgggccacgccctggtgctctggtccccctggtacggcttcgacaaggtggcg
gcgctcgccgccagccgggagttcgtgctgcgatcggccttccggcccacctacaacatg
gtcgtcaacctggtccgccgctacgaccgcgaccaggcccacgagctgctcggccggtcc
ttcgcccagttccaggccgaccgctcgctgggcaagctggcccaccgtcgggcctctcgg
caggcgctgctggccgaagccgaggccgccgccacgtgcgagcgcggcgacgtcgacgag
taccgcacgctccggcgcggcgagcgccgcgctgcgcgaggcccggaaccagcgcgagga
ccgcatcaccgctgcggtggaacggctcgtgccgggcgacgtgatccgcttcggcaccca
ccggctggcggtcctgtcggcgtcgtaccgcaaggggggcatccgcctccgggtgatcga
ccccgacgcccacgtgtcggtgctcgaccccgatga
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