Aquihabitans sp. G128: KSP35_05450
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Entry
KSP35_05450 CDS
T07304
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
aqz
Aquihabitans sp. G128
Pathway
aqz03030
DNA replication
aqz03430
Mismatch repair
aqz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aqz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KSP35_05450 (dnaE)
03430 Mismatch repair
KSP35_05450 (dnaE)
03440 Homologous recombination
KSP35_05450 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aqz03032
]
KSP35_05450 (dnaE)
03400 DNA repair and recombination proteins [BR:
aqz03400
]
KSP35_05450 (dnaE)
Enzymes [BR:
aqz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KSP35_05450 (dnaE)
DNA replication proteins [BR:
aqz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KSP35_05450 (dnaE)
DNA repair and recombination proteins [BR:
aqz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KSP35_05450 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
DUF655
Motif
Other DBs
NCBI-ProteinID:
QXC62253
UniProt:
A0A8F4FSW8
LinkDB
All DBs
Position
complement(1157528..1161058)
Genome browser
AA seq
1176 aa
AA seq
DB search
MGDSFTHLHVHTEYSMLDGAARVGEVVAAAAADGQPAIGITDHGNMYGILPFYKACKANG
IKPILGTEAYMAHDSRLERPSRRGRVDDTGGDAGGGQKLYYHLTLLAESYAGYRNLIQLS
SRAFMEGYYYKPRLDWELLDQHSEGIIATTGCLGGHVLQHLLRGDEEAALKAAGRLQDIF
GRDNLFVEIQDHGIPEQHRTNPQLFDIAKRIGAPLLATNDSHYTHREDAVAHDALLCVQT
GSLMSDPDRFKFHGDDHYLKSAREMRDLFSEVEVACDNSLWIAERCEVEIEFGKPLLPNF
PLPEGFEDDAAYLRHLTFEGAKKRWGDPLPDAAVERLAFELEVIGNMGFSSYFLITWDLI
KHARDLNIRVGPGRGSAAGCAVAYTLWITDLDPIKYDLLFERFLNPSRISMPDIDMDFDS
RYRDEMIRYAAERYGRDHVAQIVTFSTIKARAAVRDAARVLGYPYAVGDKVAKAMPPLIM
GRDTPLYACLEPNEKFADGYKMAGDLRKMYEEEEDLRKVIDVAKGLEGLRRQDGIHAAAV
VITKDPLTEYLPIQRKPLAGQDIENAPVVTQYEMNVVEELGLLKMDFLGLRNLDVISGAL
ELVKGFRGVDLDIDNISLNDEKTLEMLCRGDSIGVFQLEGGAMRALMRSLAPDCFEDVAA
LIALYRPGPMSVNMHNDYADRKNGRKPVEYFHPAAEELLGDTYGLMIYQESVMRVSQRFA
GYSLAEADNLRKACGKKKPELMAKERSKFVEGCTSAGFGELGTPLFDNIEGFANYAFNKS
HSFGYGVVTFQTAYLKAHYPVEYLAALLTSVKTSLEKAAVYLNECRTMGIQVLVPDVNRS
DVDFVAARLDDGTEVIPFGLSAVRNVGEALVEKIVEERRANGDFADFYDFCERVDMTVLN
KKTLESLIKAGGFDSVGHPRRGLLAVFEQIVDNTIARRKERDMGVMTLFGDLDDGGAGAS
FDERAKIPDLRFEKKEQLAFEKEMLGLYVSDHPLMGAEAALRRKVDNTIAELAELDDGAM
RTIGGVVNGLQRKWTKKGDLMAVFTLEDLQTSIEVMVFPKTMTDIGHQLADDAVLIVKGR
VDKRDDTPKFIAMDVEVFDGVSDGAPPLRLKVAPHRLDAGTVDELKGLLTRFPGESQVFL
HLGEDKVLRLPEQFCVDTSHGLIGELRVLLGSGAIL
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
gtgggcgactcgttcacccacctgcacgtgcacaccgagtactcgatgctcgatggtgcg
gcccgtgtcggcgaggtcgtggccgccgccgcggccgatggccagccggcgatcggcatc
accgatcacggcaacatgtacgggatcctcccgttctacaaggcgtgcaaggccaacggg
atcaagccgatcctgggcaccgaggcctacatggcccacgactcgcggctcgagcggccc
agccgccggggccgggtggacgacaccggtggtgacgccggcggcggccagaagctctac
taccacctgaccctgctggccgagagctacgccggctaccggaacctgatccagctctcg
agccgggccttcatggagggctactactacaagccccggctcgactgggagctgctcgac
cagcactccgagggcatcatcgccaccaccggctgcctcggcgggcacgtgctccagcac
ctcctgcggggcgacgaggaggcggcgctcaaggccgccggccgcctccaggacatcttc
gggcgcgacaacctgttcgtggagatccaggaccacggcatccccgagcagcaccgcacc
aacccccagctgttcgacatcgccaagcggatcggggcaccgctgctggccaccaacgac
agccactacacccaccgcgaggacgccgtcgcccacgacgccctgctgtgtgtgcagacg
ggctcgctcatgagcgaccccgaccggttcaagttccacggcgacgaccactacctgaag
tccgcccgcgagatgcgcgacctcttctccgaggtcgaggtggcgtgcgacaactccctc
tggatcgccgagcgctgcgaggtcgagatcgagttcggcaagccgctgctgccgaacttc
ccgctgcccgagggcttcgaggacgacgccgcctacctgcgccacctcaccttcgagggc
gccaagaagcgctggggcgacccgttgccggacgccgcggtcgagcggctcgccttcgag
ctcgaggtcatcgggaacatgggcttcagctcgtacttcctcatcacgtgggacctcatc
aagcacgcccgggacctgaacatccgcgtcggcccgggccgtggctccgccgccggctgc
gcggtggcctacacgctctggatcaccgacctcgacccgatcaagtacgacctgctgttc
gagcggttcctcaacccgtcccgcatctccatgcccgacatcgacatggacttcgactcc
cgctaccgggacgagatgatccgctacgcggcggagcgctacggccgggaccacgtcgcc
cagatcgtcaccttctccaccatcaaggcccgggccgcggtgcgagacgccgcacgcgtg
ctcggttacccctacgcggtgggcgacaaggtggccaaggccatgccgccgctgatcatg
ggccgggacacgccgctctacgcctgcctcgagcccaacgagaagttcgccgacggctac
aagatggccggcgacctccggaagatgtacgaggaggaggaagacctccgcaaggtcatc
gacgtggccaagggcctcgaaggcctgcgccgccaggacggcatccacgccgccgcggtg
gtgatcaccaaggacccgctcaccgagtacctgcccatccagcgcaagccgctggccggc
caggacatcgagaacgccccggtggtcacccagtacgagatgaacgtggtcgaagagctg
ggcctgctcaagatggacttcctgggcctgcgcaacctcgacgtcatctccggcgcgctc
gagctggtgaagggcttccgcggcgtcgacctcgacatcgacaacatctcgctgaacgac
gagaagacgctggagatgctgtgccgcggcgactccatcggcgtgttccagctggagggc
ggcgccatgcgcgccctcatgcgctcgctggccccggactgcttcgaggacgtggcggcg
ctcatcgcgctctaccggccgggccccatgtcggtgaacatgcacaacgactacgccgat
cgcaagaacggccgcaagccggtggagtacttccaccccgccgccgaggagctgctcggc
gacacctacggcctgatgatctaccaggagtcggtgatgcgggtgagccagcgcttcgcc
ggctactccctggccgaggccgacaacctgcgcaaggcctgtggcaagaagaagcccgag
ctcatggcgaaggagcgctcgaagttcgtcgagggctgcaccagcgccggcttcggcgag
ctgggcaccccgctgttcgacaacatcgagggcttcgccaactacgccttcaacaagagc
cacagcttcggctacggcgtggtcaccttccagacggcgtacctcaaggcccactacccg
gtggagtacctggcggcgctgctcaccagcgtgaagaccagcctggagaaggcggcggtc
tacctgaacgagtgccgcaccatgggcatccaggtcctggtgccggacgtgaaccgctcc
gacgtcgacttcgtggccgcccgcctcgacgacggcaccgaggtcatccccttcgggctc
tccgccgtgcgcaacgtgggcgaggccctggtggagaagatcgtcgaggagcgccgggcc
aacggcgacttcgccgacttctacgacttctgcgagcgcgtcgacatgaccgtgctcaac
aagaagacgctggagtcgctcatcaaggccggcggcttcgactccgtcggccacccgcgc
cggggcctgctggcggtcttcgagcagatcgtcgacaacaccatcgcccgtcgcaaggag
cgggacatgggcgtgatgacgctcttcggcgacctcgacgacgggggagcgggcgccagc
ttcgacgagcgggccaagatcccggacctgcgcttcgagaagaaggagcagctggccttc
gagaaggagatgctcgggctctacgtgagcgaccacccgctcatgggggccgaggccgcg
ctgcgccgcaaggtcgacaacaccatcgccgagctggccgagctcgacgacggcgccatg
cgcaccatcggtggcgtggtcaacggcctgcagcgcaagtggaccaagaagggcgacctc
atggccgtcttcaccctggaggacctgcagacctcgatcgaggtcatggtgttccccaag
accatgaccgacatcggccaccagctcgccgacgacgccgtgctcatcgtgaaggggcgc
gtcgacaagcgcgacgacacgcccaagttcatcgccatggacgtcgaggtgttcgacggc
gtcagcgacggcgccccgccgctgcggctcaaggtcgccccgcaccggctcgacgccggc
acggtcgacgagctcaagggcctgctgacccgcttcccgggcgagtcgcaggtgttcctg
cacctcggcgaggacaaggtcctgcgcctcccggagcagttctgcgtcgacaccagccac
ggcctgatcggcgagctgcgggtgctgttgggcagcggcgccatcctctga
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