Aquihabitans sp. G128: KSP35_07250
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Entry
KSP35_07250 CDS
T07304
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
aqz
Aquihabitans sp. G128
Brite
KEGG Orthology (KO) [BR:
aqz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aqz03016
]
KSP35_07250 (truB)
Enzymes [BR:
aqz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
KSP35_07250 (truB)
Transfer RNA biogenesis [BR:
aqz03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
KSP35_07250 (truB)
Prokaryotic type
KSP35_07250 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
DKCLD
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
QXC62585
UniProt:
A0A8F4FTM3
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All DBs
Position
complement(1533207..1534106)
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AA seq
299 aa
AA seq
DB search
MGRRGGPHTGPDGLVVVDKPAGWTSHDVVAKSRGLLGTRKVGHAGTLDPDATGVLLLGVG
RATKLLRFLSPLGKAYVGEVQLGTETSTLDAAGEVTATFDMAGTTLDQVRAASLAFVGPI
EQIPPMVSAVKIDGKRLHELARQGIEVERPPRPVTVHSLEVLPGPEGDDLVFTLAVSCSS
GTYIRTLAADIGTALGGGAHLRTLRRTSVGPFTLADAVPLEQVDAERVLPMTDAVRHLDQ
VAVDEVRAADVAVGKVLALDELGVDGDGPWAVLGPSGSLLAVYEPFRTGTAKPSLVIPA
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggggcgccgcggcgggccccacaccgggcccgacggcctcgtcgtcgtcgacaagccg
gcgggctggaccagccacgacgtcgtcgccaagtcgcgaggcctgctcggcacccgcaag
gtcggccacgccggcacgctcgaccccgacgccacgggggtcctcctgctcggcgtcggc
cgcgccaccaagctcctgcgcttcctctcaccgctgggcaaggcctacgtgggcgaggtg
cagctggggaccgagacgagcacgctcgacgccgccggtgaggtcacggccaccttcgac
atggcggggaccaccctcgaccaggtgcgggcggcgtcgctggccttcgtggggcccatc
gagcagatcccgccgatggtctcggcggtcaagatcgacggcaagcggctgcacgagctg
gctcgccagggcatcgaggtcgagcgtccgccccggccggtcacggtgcactcgctggag
gtgctgcccggccccgagggtgacgacctggtgttcaccctggccgtcagctgctcctcc
ggcacctacatccggacgctcgccgccgacatcggcaccgcgctcggcggcggggcgcac
ctgcgcacgctgcgccggacctcggtcgggccgttcaccctcgccgacgccgtgccgctg
gagcaggtcgacgccgagcgcgtcctgcccatgaccgatgccgtgcgccacctcgaccag
gtggccgtcgacgaggtccgggccgccgacgtggccgtcggcaaggtgctggccctcgac
gagctcggcgtcgacggcgacggcccgtgggcggtcctcggtccctccgggtccctcttg
gcggtgtacgagccgttccgcaccggtaccgccaagccctcgctcgtcatcccggcctga
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