Aquihabitans sp. G128: KSP35_11200
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Entry
KSP35_11200 CDS
T07304
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
aqz
Aquihabitans sp. G128
Pathway
aqz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aqz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KSP35_11200 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aqz03400
]
KSP35_11200 (recD)
Enzymes [BR:
aqz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
KSP35_11200 (recD)
DNA repair and recombination proteins [BR:
aqz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KSP35_11200 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
RecD_N
Viral_helicase1
AAA_11
UvrD-helicase
Helicase_RecD
AAA_22
AAA_16
SH3_13
UvrD_C
AAA_28
Flavi_DEAD
SLFN-g3_helicase
DEAD
AAA
Herpes_Helicase
Motif
Other DBs
NCBI-ProteinID:
QXC63296
UniProt:
A0A8F4FWN6
LinkDB
All DBs
Position
complement(2343517..2345475)
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AA seq
652 aa
AA seq
DB search
MVGPAPFVPASVEVLRPFVDAGVVGAGEVHLAATVARLSPGTDPLVLLAVAVAARAPQLG
HVGIELAAAADRVLDRFDEVAVALPWPDAGPWAAALASSPAVAAPADARREPLAPLVWDG
TRIYLQRYWAYEAEVAADLRLRAGASAGGPAIDHAIAELFPAPGEGGPDLQLAAATVALG
HRLSVIAGGPGTGKTRTVARLLAAAQRAAAADGRNLEVALAAPTGKAAARMTEAVRQAVA
EARAEGVIDAALAERLVATEATTIHALLGWAPGVAFRHDREHPLTHDLVVIDETSMVSLP
LMARLLQAVRPEASLVLVGDPDQLASVDAGTVLADLVGERGPTRTGPALVAPRRRRAAPV
EDPATPRLFDPDVLAAPTPTPASPPPEVSVTADAPLEGLVTVLERVHRFGAGSGIAALAD
AVRRGDADAALALLDGSRADLTWARPDRPAAVASVEEAVVAAATEVARAALAGDAEAGLA
AALRVKVLAATRHGDGGLYDWTARIEAAVGAAVPELAATARWYAGRPVLVTANDRINRLA
NGDVGLVVARDGGTAVALPQGAEVRYVPVSRLHEAETWWAMTIHKSQGSEFPHVVVSLPG
VRSPILTRELLYTAITRAREQVTLVATEEALRLAIGRPVARASGLGARLWPT
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atggtcggccccgcacccttcgtcccggcgtcggtcgaggtcctccggccattcgtcgat
gccggcgtggtcggcgccggcgaggtgcacctcgcggcgacggtcgcccggctcagcccg
ggcaccgatccgctcgtgctcctcgccgtggcggtggcggcccgcgccccgcagctgggg
cacgtgggcatcgagctggcggcggccgccgatcgggtcctcgaccggttcgacgaggtg
gcggtggccctgccctggccggacgcgggtccctgggctgcggcgctcgcctccagcccg
gcggtcgccgcgcccgccgacgcccgtcgggagccgctggccccgctggtgtgggacggc
acccgcatctacctccagcgctactgggcctacgaggccgaggtcgccgccgacctgcgc
ctccgggccggtgccagcgccggcggtcctgcgatcgaccacgccattgccgagctgttc
ccggctcctggcgagggcgggcccgacctccagctggccgcggccaccgtggcgctgggc
caccggctctcggtgatcgcgggcggacccggcaccggcaagacccggaccgtggcccgc
ctcctcgccgcggcccagcgggcggcggccgctgacgggcgcaacctcgaggtcgccctc
gccgcacccaccggcaaagcggccgcccgcatgaccgaggcggtgcggcaggcggtcgcc
gaagcccgagccgagggcgtgatcgatgccgcgctcgccgagcggctcgtggccaccgag
gccaccaccatccacgctctgctcggctgggcccccggggtggccttccgccacgaccgc
gagcacccgttgacccacgacctggtcgtcatcgacgagacctccatggtctcgctgccg
ctgatggcccgcctgctccaagcggtgcggcccgaggcgtcgctcgtgctggtgggcgac
ccggaccagctggccagcgtcgacgccggcaccgtgctggccgacctggtgggggaacgg
ggcccgacccgcaccggaccggccctggtggccccgcgccgccggcgggcggccccggtc
gaggacccggccaccccgcgcctgttcgacccggacgtgctggccgcgccgacgccgacg
cccgcgtcgccgccccccgaggtctcggtcaccgccgacgcgccgctcgaggggctggtg
acggtgctggagcgggtgcaccgcttcggcgccggctcgggcatcgccgccctggccgac
gccgtgcggcggggcgacgccgatgccgccctggccctgctcgacggcagccgggccgac
ctcacctgggcccggcccgatcggcccgccgctgtcgcatccgtggaggaagcggtcgtc
gcggccgccaccgaggtggcccgtgccgcgctggccggcgatgccgaggccgggttggcg
gcggccctgcgggtcaaggtcctggccgccacccgccacggcgacggcgggctctacgac
tggaccgcccgcatcgaggcggcggtgggcgccgccgtgcccgagctggcggccaccgcc
cgctggtacgccggccgcccggtgctggtcaccgccaacgaccgcatcaaccgcctggcc
aacggcgacgtcggcctggtggtggctcgcgacggcggcaccgcggtggccctgccccag
ggggccgaggtccgctacgtccccgtgtcccggttgcacgaggccgagacgtggtgggcc
atgaccatccacaagagccagggctcggagttcccccacgtggtggtctcgctgcccggg
gtgcggtcgccgatcctcacccgcgagctgctctacaccgccatcacccgggcccgggag
caggtcaccctcgtggccaccgaggaggcgctgcggttggccatcggccgccccgtggcc
cgtgccagcggcctcggcgcccgcctctggcccacctga
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