Aquihabitans sp. G128: KSP35_13810
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Entry
KSP35_13810 CDS
T07304
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
aqz
Aquihabitans sp. G128
Brite
KEGG Orthology (KO) [BR:
aqz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aqz03032
]
KSP35_13810
03400 DNA repair and recombination proteins [BR:
aqz03400
]
KSP35_13810
Enzymes [BR:
aqz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
KSP35_13810
DNA replication proteins [BR:
aqz03032
]
Prokaryotic type
DNA Topoisomerases
KSP35_13810
DNA repair and recombination proteins [BR:
aqz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KSP35_13810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
HDPD
Motif
Other DBs
NCBI-ProteinID:
QXC59471
UniProt:
A0A8F4FPU0
LinkDB
All DBs
Position
2884616..2885632
Genome browser
AA seq
338 aa
AA seq
DB search
MDLSLASADAAGLRYVVDDIDGIRRRKRGKGFSYELPDGTVITDPAERARIAALAIPPAW
TDVWICPAPDGHILATGRDDRGRKQYRYHPEWDRVRSEDKFGALPAFAKGLPTLRQQLDA
DLRRKGLPREKVLALVVRLLDRSLIRVGNEAYAAENESYGLTTMLAEHVDVHGSCIAFDF
TAKGGLARNVYVEDAKLATIVQGCSELHGQDLFTYETPDGIADVTSSDVNAYLRDVLGEG
TTAKHFRTWGGTVSAAAALAISRPPATEAQADTAVLAAFDVAAEVLGNTRTVCRQSYVHP
AVPEAYRSGLLAERWPHARETKHLTRPERLVQRLLEEE
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
gtggacctctccctcgcatcggccgacgccgccgggctgcgctacgtggtcgacgacatc
gacggcatccgccgccgcaagcggggcaagggcttcagctacgagctccccgacggcacg
gtcatcaccgaccccgccgagcgagcccgcatcgccgccctcgccatccccccggcctgg
accgacgtgtggatctgccccgctcccgacggccacatcctggccacggggcgcgacgac
cggggccgcaagcagtaccgctaccaccccgagtgggaccgggtccgcagcgaggacaag
ttcggcgccctcccggccttcgcgaaggggctcccgacgctgcgccagcagctcgacgcc
gacctccgcaggaagggcctgccccgcgagaaggtgctggccctggtggtgcgcctgctc
gaccgctcgctgatccgagtcggcaacgaggcctacgccgccgagaacgagtcgtacggc
ctcaccaccatgctggccgagcacgtcgacgtgcacgggtcctgcatcgcgttcgacttc
accgccaagggtgggctggcccgcaacgtctacgtggaggacgccaagctggccacgatc
gtgcaggggtgctccgagctgcacggccaggacctcttcacctacgagacgcccgacggc
atcgcggacgtgacctcgtccgacgtcaacgcctacttgcgcgacgtgctcggcgagggc
accaccgccaagcacttccgcacgtggggcggcaccgtctcggccgccgccgccctggcc
atctcgcgacctccggcgaccgaagcccaggccgacaccgccgtgctggctgccttcgac
gtggccgccgaggtgctgggcaacacccgcaccgtgtgccgccagtcctacgtgcacccc
gccgtgcccgaggcctaccgctccggcctgctcgccgagcgctggccccacgcccgcgag
accaagcacctcacccgacccgagcgcctggtccagcgcttgctcgaagaggagtga
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