Entry |
|
Symbol |
gyrA
|
Name |
(GenBank) DNA gyrase subunit A
|
KO |
|
Organism |
aqz Aquihabitans sp. G128
|
Brite |
KEGG Orthology (KO) [BR:aqz00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:aqz03032]
KSP35_15725 (gyrA)
03400 DNA repair and recombination proteins [BR:aqz03400]
KSP35_15725 (gyrA)
Enzymes [BR:aqz01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
KSP35_15725 (gyrA)
DNA replication proteins [BR:aqz03032]
Prokaryotic type
DNA Topoisomerases
KSP35_15725 (gyrA)
DNA repair and recombination proteins [BR:aqz03400]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KSP35_15725 (gyrA)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
complement(3288121..3290643)
|
AA seq |
840 aa
MADDELPPTDLPDAEGGDDGEGTGTDPTMTAHGLIEPIEIEDEMERSFLDYSMSVIVSRA
LPDVRDGLKPVHRRIMWAMHDLGARPDRPFMKCARVTGEAGGKYHPHGDQSIYAALVRMA
QDHSMRHPLVQGHGNFGSPDYGPAAARYTECRQSPLALSMLADIDEETVDFAENYSGEFS
EPTVLPSRFPNLLVNGSQGIAVGMATNIPPHNLGEVIDATVHLLDNPDATPDDLMAHVKG
PDFPTGALIMGRAGIMDAYRTGRGSIRMRAVAEIEESTRGGDKIVITELPFQVGPNQVLS
KIQELVATKEIEGISDANEESSGNDTRIVITLKRDAPGLVILNNLYKRTPMQTTFSVNTV
ALVDGVPRTLNLRECLGYYIDHQVEVITRRTEYRLRKARDRAHIVEGLIKALDLIDQIIA
TIRASEDKAAAREALQQAPFEFSETQAEYILDMQLHRLTRLGRAQLEEEMAELRRRIAEY
EAILGDRAVLDEVLKTELVAIREKYATDRVSKVTYDVGDIDIEDLIDDEDLVVTMSAKGY
VKTVAFDAFKSQGRGGRGVSGGKLRDEDYIAHIITTTAHAYLLFFSNLGRVYRLKAHEIP
MKDRTARGTAIVNLLPLQPGEQIKAIIDTRDYETNQYLFFATRNGQVKKTRFSEYDSSLR
AGLIAINLRDGDELVKVIPVNDADEIFMVSRSGMTIRYTQEDVRPMGRSTAGVRGMKMKP
GDEVVSCDVARDDTAILIVTDGGYGKRTQLDKFNIQNRGGQGVRGIKLTAKKGFVVAAFM
VAIDDEIFAIASDGVVTRMEVRTISSQGRDATGVRVMNVEGDRTVAAVAPVLTAGENEEA |
NT seq |
2523 nt +upstreamnt +downstreamnt
atggctgacgacgagctccccccgaccgacctcccggacgccgaaggcggcgacgacggc
gagggcaccggcaccgaccccacgatgacggcccacggcctcatcgagcccatcgagatc
gaagacgagatggagcggtccttcctggactactccatgtcggtcatcgtctcccgcgcc
ctgcccgacgtgcgcgacggcctcaagccggtgcaccgccggatcatgtgggccatgcac
gacctcggtgcccgtcccgaccggccgttcatgaagtgcgcccgcgtcaccggcgaggcc
ggcggcaagtaccacccccacggcgaccagtcgatctacgcggcgctggtgcgcatggcc
caggaccactccatgcgccacccgctggtgcagggccacggcaacttcggctcgcccgac
tacggccccgccgccgcccggtacaccgagtgccgccagtccccgctggccctctcgatg
ctggccgacatcgacgaggagaccgtcgacttcgccgagaactactccggtgagttctcc
gagcccaccgtgctccccagccgcttcccgaacctgctggtcaacggcagccagggcatc
gccgtgggcatggccaccaacatcccgccgcacaacctcggcgaggtcatcgatgccacg
gtccacctgctcgacaatcccgacgccacgccggacgacctcatggcccacgtcaagggc
ccggacttccccaccggggcgctgatcatgggccgcgccgggatcatggacgcctaccgc
acgggtcgcggctccatccgcatgcgcgccgtggccgagatcgaggagtccacccggggt
ggcgacaagatcgtcatcaccgagctgcccttccaggtgggcccgaaccaggtcctctcc
aagatccaggagctggtggccaccaaggagatcgaaggcatctccgacgccaacgaggag
tcctcggggaacgacacccggatcgtgatcacgctgaagcgagacgccccgggcctggtc
atcctgaacaacctctacaagcgcacccccatgcagaccacgttctcggtcaacaccgtg
gccctggtcgacggcgtgccccgcacgctgaacctgcgcgagtgcctcggctactacatc
gaccaccaggtcgaggtcatcacccgccgcaccgagtaccggctgcgcaaggcccgggac
cgggcccacatcgtcgagggcctgatcaaggcgctcgacctgatcgaccagatcatcgcc
accatccgggcctcggaggacaaggccgcggcgcgcgaggcgctgcagcaggccccgttc
gagttcagcgagacccaggccgagtacatcctcgacatgcagctgcaccgcctcacccga
ctgggccgggcccagctcgaggaggagatggcggagctgcgccgccgcatcgccgagtac
gaggccatcctcggcgatcgcgccgtgctggacgaggtcctcaagaccgagctggtcgcc
atccgcgagaagtacgccaccgatcgcgtctccaaggtcacctacgacgtcggcgacatc
gacatcgaggacctcatcgacgacgaggacctggtggtcaccatgtcggccaagggctac
gtgaagaccgtcgccttcgacgccttcaagagccagggccgcggcgggcgcggcgtctcg
ggcggcaagctccgcgacgaggactacatcgcccacatcatcaccacgacggcgcacgcc
tacctgctgttcttctcgaacctgggccgggtctaccggctcaaggcccacgagatcccc
atgaaggaccgcacggcccggggcaccgccatcgtgaacctgctgccgctccagccgggc
gagcagatcaaggcgatcatcgacacccgggactacgagaccaaccagtacctcttcttc
gccacccgcaacggccaggtgaagaagacccgcttcagcgagtacgactcgtcgctgcgg
gccgggctcatcgccatcaacctgcgcgacggcgacgagctggtgaaggtcatccccgtc
aacgacgccgacgagatcttcatggtcagccgcagcggcatgaccatccgctacacccag
gaggacgtgcgccccatgggccgctccaccgccggcgtgcgcggcatgaagatgaagccg
ggcgacgaggtcgtctcgtgcgacgtcgcccgcgacgacaccgccatcctgatcgtgacc
gacggcggctacggcaagcgcacccagctcgacaagttcaacatccagaaccggggcggg
cagggcgtgcggggcatcaagctcaccgccaagaaggggttcgtggtcgccgccttcatg
gtggccatcgacgacgagatcttcgccatcgcctccgacggggtggtcacccgcatggag
gtccgcacgatctcctcgcagggccgcgacgccaccggcgtccgggtgatgaacgtcgag
ggtgatcgcacggtggccgccgtggctccggtgctcaccgccggcgagaacgaagaggcc
tga |