Entry |
|
Name |
(GenBank) GAF domain-containing protein
|
KO |
K21405 | sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR |
|
Organism |
aqz Aquihabitans sp. G128
|
Brite |
KEGG Orthology (KO) [BR:aqz00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:aqz03000]
KSP35_23535
Transcription factors [BR:aqz03000]
Prokaryotic type
Helix-turn-helix
Other families
KSP35_23535
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
4899512..4901290
|
AA seq |
592 aa
MGRATPPPVEPRPEIAASWARSLRSGVTGDALAPSLAADADPTGRLASLAAPVLDRLSST
LADTRTTVVLTDAHAGVLDRRAGTQPLGDLLDGIGLVPGYSYAEDVVGTNGMGTAAEERR
AVLVKGPEHYAEALRPLTCMGVPIEHPVTGRLEGVLDLTCFNEDAGPWMAPLVAEAVAGI
RGQLEEDATVAERALFSAFLRASHRASGAVVSLNHSFVLTNPAAARLLDGADHGALWEIG
AAAVTGRSDDVQELLLASGSRVHARFEVVEVGERPVGAIVRLAEAVAEASTRTVGSRSGT
ASRRAAPSSPAGAPAYGPAGVTARLADEVAGALAAGERVLLRGPSGAGKLTVAKLALDHA
TVPVFDAGRAVVDGARAWLVDVEAALTGGGPVVIRHLEALGADVSAGLTAVLDATPPGVA
VIATVAEPGSTVGAPGPAAGPAAGQALADRFDRLVRVPGIADRVEELPGLIRSILGRLAP
TGAVRLAPEVVQALTRVDLPGNLRQLEALLHRVVVKRHVGTITLDDLPPEVRAATHRPHL
TAMEQHECEAIASALASADGNKAAAASALGISRSTLYRKLEAYGLQLDRRAW |
NT seq |
1779 nt +upstreamnt +downstreamnt
atgggccgagccacgccgccgccagtcgagccgaggccggagatcgccgcgtcatgggcc
cgctccttgcgctcgggcgtcaccggcgacgccctcgccccctcgctggccgccgacgcc
gaccccacgggccgcctcgcctcgctggcggcgcccgtgctcgaccggctctcgtcgacg
ctggccgacacccgcaccaccgtcgtgctgaccgatgcccacgccggcgtgctcgaccgg
cgcgccggcacgcagccgctgggcgacctgctcgacggcatcgggctggtgccgggctac
tcctacgccgaggacgtggtgggcaccaacggcatgggcaccgcggccgaggagcgccgg
gccgtgctggtgaaggggccggagcactacgccgaggcgctccgcccgctcacgtgcatg
ggcgtgccgatcgagcaccccgtcaccggtcggctcgaaggcgtgctcgacctcacctgc
ttcaacgaggacgccgggccgtggatggcgccgctggtggcggaggccgtcgccggcatc
cgcggccagctcgaggaagacgccacggtggccgagcgggcgctgttcagcgccttcctg
cgggcgtcgcaccgggcctcgggcgcggtggtgtcgttgaaccactcgttcgtcctgacc
aaccccgccgccgcccggctgctcgacggcgccgaccacggcgcgctgtgggagatcggc
gccgctgcggtgaccgggcgcagcgacgacgtgcaggagctcctgctggccagcgggtcg
cgcgtccacgcccggttcgaggtcgtggaggtgggggagcggcccgtcggggccatcgtg
cgcctggccgaggcggtggcggaggcgtcgacgcgcaccgtcggctcccggtcgggcacc
gcatcgcggcgcgccgccccgtcatcacccgccggggcccctgcgtacggaccggcaggg
gtcaccgcccgcctcgccgacgaggtggccggcgcgctggccgccggcgagcgggtcctg
ctccgtgggccgagcggcgccggcaagctgaccgtggccaagctggcgctggaccacgcg
acggtgccggtgttcgacgccgggcgagcggtggtcgacggcgcccgggcgtggctggtc
gacgtcgaagcggctctcaccggtggcggcccggtcgtgatccgccacctcgaggcgttg
ggggccgacgtgtcggcggggctgaccgcggtgctggacgccacgcccccaggcgtcgcc
gtgatcgccaccgtggccgagcccggctcgacggtcggcgcccccgggcccgctgccggg
cctgctgccggacaggccctggccgatcgcttcgaccggctggtgcgggtgcccggcatc
gccgatcgcgtcgaggagctccccgggctgatccgctcgatcctcggccgcctggcgccc
accggcgcggtccggctggcccccgaggtggtccaggcgctcacccgggtcgacctcccc
ggcaacctccgccagctcgaggccctgctccaccgcgtggtggtgaagcgccacgtgggc
acgatcacgctggacgacctgccccccgaggtccgcgccgccacccaccgcccgcacctc
accgccatggagcagcacgagtgcgaggccatcgcctccgccctcgcgtccgccgacggc
aacaaggcggccgccgcctcggcgctcggcatctcccggtcgacgctgtaccgcaagctc
gaggcctacggcctccagctcgaccgccgggcctggtag |