Rhizobium rhizogenes K84: Arad_0035
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Entry
Arad_0035 CDS
T00850
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
ara
Rhizobium rhizogenes K84
Brite
KEGG Orthology (KO) [BR:
ara00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ara03400
]
Arad_0035 (addB)
Enzymes [BR:
ara01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Arad_0035 (addB)
DNA repair and recombination proteins [BR:
ara03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
Arad_0035 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
ACM24832
UniProt:
B9JG49
LinkDB
All DBs
Position
1:complement(27239..30430)
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AA seq
1063 aa
AA seq
DB search
MTGGHRKRILTIPAGLPFLKTLASALCDGRLTEHFRHDPSDPLSLAKVTIFLPTRRAARV
LRSEFVDLLGGRSAILPVIRPLGETDDDSGYFEEALPATADLAQPLANTARLLELARLIL
AWRNKLPQIVRDIHSDSPLVAPASPADAIWLARNLAELIDSIETEDRDWAALGDLSTEDH
ALWWQLTAEFLQIASAFWPARLEELGKSSPARHRNAILRAEAQRIAIMQHAGPIIIAGST
GSVPATAELIAAVASLPQGVIVLPGLDLSMPEEDWQLVAPETGIGERVDPTTRSHSQYGL
SLLLKRLHTPRSEVETVAEATEDMQMRAEVLSRALAPAKATSGWGAWQQTLAPDAISNAF
ADVALIEAANEREEATAIAIALRLALEKPGQDGGESQAALITPDRNLARRVTAELARFGI
TADDSAGTPLTATPQGALLQLLLEATLRPGDPVAIVSLLKHPLARFGLPQDALQLGVDAL
EILALRGGIADVDIGALEPLLDRQLAEQAKNRHTPQWRKSLAPEAVDRARELARQVSGAC
EPLASALSQQSSDGLPTLSEWAERTGRALEAVAIDERGSLAALWSGEAGDTLASLLKEII
DTDGQLEADGPQWIDIMAALCAGQAVKPRALSHPRLFIFGTLEARLQSVDTLILGGLNEG
SWPGQTANNPFISRTMKTEIGLEPPERRIGQLAHDFEMANGTRDLIYSRALRQGSTPTVA
SRWLQRLIALGGKAFTSELKARGDQYRHWAGMIDQGENQAPAQRPAPRPPAELQPKSYSF
SEVGRLRRDPYAIYARRVLRLDPIDPFNRDPGPAERGTLYHKIIDRFIREGHIAGTPDAS
LAMDHILTELFDAEQLPVHIDSVWRPRFREVARAFIIWEAERRPEIRKTATEVPAGVQIE
PIGIRLTGVADRIDFKGGKAADIIDYKTGYNPSPAQARTLLDPQLALEAYALKAGAFRDI
DALVPENLLYVRLRPGDRFKVDQVNNELSSRGGKTETKSALDLAQESMDQLVKFVSLLQS
GEKGFSSRLIPAQQFEYGGDYDHLARVSEWSTAETEQEGGGDE
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atgacgggcggccaccggaaacgcatcctgacgatcccggcgggcctgcctttcctgaag
acccttgccagcgctctttgcgacggccggctgaccgagcatttccgtcatgatccgagc
gatccgctatcgctcgccaaggtcacgatcttcctgccgacacggcgcgcggcgcgcgta
ttacgctcggaattcgtcgacctgctcggcggccgttccgccatcctgccggtgatccgt
ccactcggcgagaccgacgacgacagtggttatttcgaggaagcgctgccggcgaccgcc
gatctggcacagccgcttgccaataccgcacggctgctggaactggcgcggctgatcctt
gcctggcgcaacaagctgccgcagatcgtccgcgacatccattcggactcgccgctggtt
gcgcccgcaagcccagccgatgccatctggcttgcccgcaatctcgccgaactcatcgat
tccattgagaccgaggatcgcgactgggcagcccttggcgatctcagcaccgaggatcat
gcactctggtggcagctgaccgccgaattcctgcagatcgccagtgccttctggccggcc
cggctggaggagcttggcaaatcctcgcccgcccggcaccgcaacgccattctgcgcgcc
gaggcgcagcggatcgccatcatgcagcatgccggcccgatcattatcgccggctcgacc
ggttcggtgccggcaacggcggagctgatcgcggccgtcgcctcactaccgcagggggtc
atcgtcctgccagggctcgatctgtccatgccggaagaggactggcagcttgttgcgccg
gaaaccggcatcggcgaaagggtcgatccgacgacgcgcagccactcgcaatatggcctg
tcgctgctgttgaagcggctgcacacgccccgaagcgaggtcgaaaccgttgccgaggcg
accgaagacatgcagatgcgcgctgaggtcctgtcgcgtgccttggcgcccgcgaaagcg
acgagcggctggggggcatggcagcaaacacttgcgcccgacgcgatcagcaacgccttt
gccgatgttgccctgatcgaggcggccaacgagcgcgaggaggcaacggcgattgccatc
gccttgcgtctggcgctggaaaagccggggcaggatggcggcgaaagccaggcggcgttg
atcacgccggaccgcaatctggcgcggcgggtgacggcggagctggcacgcttcggcatc
accgccgacgattcggccggcacgccgctgaccgcgacgccgcagggcgcgctcttgcaa
ttgctgctcgaagccacgcttcgccccggcgatcccgttgctatcgtttcgctgctcaag
catcccctcgcccgcttcggccttccgcaggacgcattgcagctcggcgtcgacgcgctg
gaaatcctggcgttgaggggcggcatcgccgatgtcgacatcggcgcgctggaaccgctg
ctcgaccggcagcttgccgaacaggcgaagaaccgccatacgccgcaatggcgcaaatcc
ctggcccccgaagcggtggaccgggcgcgcgaactggcacgccaagtcagcggagcatgc
gagccgctagcatccgcgctttcgcagcaatcgtctgacggcctccccaccctttccgaa
tgggccgaacgcacgggccgggcgctggaagccgtcgccatagatgagcgcggcagtctg
gctgcactctggtccggcgaggcaggcgatacgctcgccagcctgctgaaggaaatcatc
gatactgacgggcagctcgaagcggacggaccgcaatggatcgatatcatggcagcgctt
tgtgcgggccaagcggtcaagccacgcgccttgagccatccgcgcctgttcatcttcggc
acgctggaagcacgcctgcaaagcgtcgatacgctgatcctcggcggcttgaacgaaggc
tcctggccgggacagaccgccaacaatcccttcatttcccgcaccatgaagaccgagatc
ggcctggagccgccggagcggcgcatcggccagcttgcccacgatttcgaaatggcaaac
ggcacgcgcgacctgatctattcgcgcgcattgcgacaaggctcgactccgaccgtggcg
tcacgctggctgcagcgactgatagcgctgggcggcaaggcttttacaagcgaattgaag
gcgcgcggcgatcaatatcgccattgggccgggatgatcgatcagggcgagaaccaagcc
ccggcgcagaggccggcgccgagaccgcccgccgaactgcagccgaaaagctactccttc
agcgaggtcggccgtctgcgccgtgacccctacgcgatctatgcccggcgcgtgctgcgg
ctcgacccgatcgacccgttcaaccgcgatcccggtccggccgagcgcggcacgctctat
cacaagatcatcgaccgctttatccgcgaaggccatattgccggcacgccggatgcatcg
ctggctatggatcacatcctcaccgaattgttcgacgcagagcaattgcctgttcacatc
gacagcgtctggcggccgcgtttccgcgaagtggcgcgtgcgtttattatatgggaagcg
gagcggcggccggagatccgcaagacggcaacggaagtcccggccggcgttcagatcgag
ccgatcggcatccggctcaccggcgtcgccgaccgcatcgacttcaagggtggcaaggcc
gccgatattatcgactacaagaccggctacaatccctcgccggcgcaggcccgcacgctg
ctcgatccgcaattggccctggaagcctatgcgctcaaggccggcgccttccgcgatatc
gacgcgctcgtcccggaaaatctgctttatgtccggctgaggcccggcgaccgcttcaag
gtcgatcaggtcaacaacgagctttccagtcgtggcggcaagacggaaacaaaatcggct
ttggacctggcgcaggagtcgatggaccagctcgtcaagttcgtctccctgctgcaatcc
ggcgaaaagggcttctcatcacggctgatcccggcgcaacaattcgaatatggcggcgat
tacgatcacctcgcccgcgtctcggaatggtcgacggcggagaccgaacaggaggggggc
ggcgatgagtga
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