Rhizobium rhizogenes K84: Arad_0171
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Entry
Arad_0171 CDS
T00850
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ara
Rhizobium rhizogenes K84
Brite
KEGG Orthology (KO) [BR:
ara00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ara03016
]
Arad_0171 (truB)
Enzymes [BR:
ara01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Arad_0171 (truB)
Transfer RNA biogenesis [BR:
ara03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Arad_0171 (truB)
Prokaryotic type
Arad_0171 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
ACM24928
UniProt:
B9JGT2
LinkDB
All DBs
Position
1:complement(155171..156103)
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AA seq
310 aa
AA seq
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MSKPRKPKGRPISGWLILDKPVDFGSTEAVSKIKWLFKAQKAGHAGTLDPLASGMLPIAL
GDATKTVPYVMDGRKIYEFTVSWGEERATDDLEGEVTQSSDKRPSEDEIRALLPNYTGVI
NQIPPQFSAIKIAGERAYDLAREGETVEIPSREVEIFRLTLLACPDADTAHFEVECGKGT
YVRALARDFGRDLGCYGHISGLRRSFVAPFAEEAMVPLADLVALEAIEDADERLAALDAL
LIDTAEALSSLPHLVINDDQAHRLKMGNPILVRGRDAPVAETEAYATARGKLIAIGEIGE
GEFRPKRVFG
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaccacgcaagcccaagggccgtccgatttcgggctggctgatcctcgacaag
ccggttgatttcggctcgaccgaggccgtttccaagatcaaatggctgttcaaggcgcag
aaggcgggccatgccggcacgctcgatccgcttgcctccggcatgctgccgatcgcgctc
ggcgacgccaccaagaccgttccctacgtcatggacggccgcaagatctacgaattcacc
gtcagctggggcgaggaacgcgccacggacgacctcgaaggcgaggtgacgcagagttcg
gacaagcgtccaagcgaagacgagattcgcgcgctgctgccaaactatacgggtgtcatc
aaccagatcccgccgcagttttccgcgatcaagatcgccggcgaacgcgcctacgatctc
gctcgcgaaggcgaaacggtcgaaattccgtcgcgcgaagtcgagatcttccgcctgacg
ctgcttgcctgcccggatgccgacacggcgcatttcgaagtggaatgcggcaaaggcacc
tatgtccgggcgcttgcccgcgatttcggccgcgatctcggctgctacggccatatttcc
ggcctgcgccgcagcttcgtcgcccccttcgccgaggaggccatggtgccgctcgccgat
ctggtggcgctcgaggcgatcgaggacgcggatgagcggcttgccgccctggacgcgctg
ctgatcgacaccgccgaggcactgtcatccctaccgcatctcgtcatcaacgacgatcag
gcgcatcgcctgaagatgggcaatcccattctcgtgcgcggccgcgatgccccggttgcc
gaaacagaggcctatgccaccgcgcgcggcaagctgatcgccatcggcgagatcggcgaa
ggcgaattccgcccgaagcgggttttcggctga
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