Rhizobium rhizogenes K84: Arad_0482
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Entry
Arad_0482 CDS
T00850
Name
(GenBank) conserved hypothetical protein
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
ara
Rhizobium rhizogenes K84
Brite
KEGG Orthology (KO) [BR:
ara00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ara03016
]
Arad_0482
Enzymes [BR:
ara01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
Arad_0482
Transfer RNA biogenesis [BR:
ara03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
Arad_0482
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Gene cluster
GFIT
Motif
Pfam:
2_5_RNA_ligase2
LigT_PEase
Motif
Other DBs
NCBI-ProteinID:
ACM25165
UniProt:
B9J7J3
LinkDB
All DBs
Position
1:complement(411312..411926)
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AA seq
204 aa
AA seq
DB search
MRNNGQLSLNLGVGSRMRKSKADPTHVEALYFAILPDPDIASASVDLANDLRLQHGFSAK
PRRPDLSHISLYKIGSYRGLPEEAAFAAMQAASTVRRRSFQVEFDRAVSFGGGDNRPLVL
WNRDGNAELKALHRELNDAMQLTGFANDDGGKFEPHMTLLYQGHLIPEVMLERPVTWTVR
DFVLVNSLQGKARHEHLCYWLLSD
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgagaaacaacggacagctttcgctcaatctcggagtgggatcgcggatgcgaaaatcc
aaagccgatccaacgcatgtggaagctctttatttcgccatcctgccggatccggacata
gcctcggcaagtgtcgacctggcgaacgatctgcgcctgcaacatggcttttcggcaaag
ccgcgccgcccggatctgtctcatatctcgctttataagatcggctcctatcgcggcctg
ccggaggaagcggcgtttgcggcaatgcaggctgcatcgaccgtcaggaggcgatccttc
caggtggagtttgaccgggcggtcagcttcgggggtggcgacaatcgcccgctggttctc
tggaacagggacggaaatgcggagctgaaggcactccatcgagagttgaacgatgccatg
cagctcaccggattcgctaatgacgatggaggaaaattcgagccgcatatgacgctgctc
tatcagggccatctcattccggaggtcatgctcgaaaggcccgtcacctggaccgtccgg
gatttcgtgctcgtcaacagcctgcagggcaaggccaggcacgaacatctttgctactgg
ctgctatcggactga
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