KEGG   Rhizobium rhizogenes K84: Arad_0803
Entry
Arad_0803         CDS       T00850                                 
Symbol
lhr
Name
(GenBank) ATP-dependent RNA/DNA helicase protein
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
ara  Rhizobium rhizogenes K84
Brite
KEGG Orthology (KO) [BR:ara00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ara03400]
    Arad_0803 (lhr)
Enzymes [BR:ara01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Arad_0803 (lhr)
    5.6.2.6  RNA 3'-5' helicase
     Arad_0803 (lhr)
DNA repair and recombination proteins [BR:ara03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    Arad_0803 (lhr)
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr DEAD Helicase_C ResIII Cas3-like_C_2 PSD4
Other DBs
NCBI-ProteinID: ACM25413
UniProt: B9J911
LinkDB
Position
1:656998..659508
AA seq 836 aa
MDQIDSESHLALPAPFIRWFAEKGWQPRAHQLELLARAEAGESTLLIAPTGAGKTLAGFL
PSLTDLTRRGKIPPGSAFTGIHTLYISPLKALAVDIERNLMKPVTEMGLPVSVENRTGDT
PSGKRQRQKLNPPDILLTTPEQVALLLANREAERFFKDLKYIVLDELHSLVTSKRGHMLS
LGLARIRELAPRVQTIGLSATVAEPMDLQKWLVAQEEGAERHAGLVMVEGGAKPDISILA
TDERIPWSGHSAKYAIPDIYRELKEHRTTLLFVNTRSQAEMLFQELWSANDDNLPIALHH
GSLDVGQRRKVEAAMAANRLRAVVATSTLDLGIDWGDVDLVIHVGAPKGASRLAQRIGRA
NHRMDEPSKAILVPANRFEVMECQAALDANYVGAQDTPPVGAGALDVLAQHILGMACAEP
FDMLELYDEVRSASPYADLSWETFERIVDFVATGGYALRTYERYARIRKTPEGRWRVSNP
QVAQQYRLNLGTIVEEAMLNIRMVKRNALGSLGRGGASLGKVEEYFLEQLSPGDTFLFSG
KVLRFEGIRENECLASQAFSMDPKIPSYAGGKFPLSTYLADQVRSMIADPDRWRRLPDQV
RDWLEIQKDKSMLPKRDELLIETFPRGSRAYMVAYPFEGRLAHQTLGMLLTRRLERAGAK
PMGFVATDYSLGIWGLEDLGVMIANGHLSLSDLFDEDMLGDDLEAWLDESFLLKRTFRNC
AVIAGLIERRHPGKEKTGRQVTVSADLIYDVLRSHEPDHILMQATRQDAATGLLDIGRLG
DMLKRIKGHITHRALDHISPLAVPVMLEIGKVPVPGEAHDVLLAEAADDLIREAME
NT seq 2511 nt   +upstreamnt  +downstreamnt
gtggaccagatcgattccgagagccatcttgccttgcctgccccttttatccgctggttc
gcggaaaagggctggcagccgcgcgcgcatcagttggaattgctggcgcgcgccgaggcc
ggcgaaagcaccttgctgattgcgccgacgggagccggcaagacgctggccggcttcttg
ccgtcgctcaccgacctgacacgccggggcaaaatcccgccgggctccgctttcaccggc
atccacacgctctacatctcgccgctgaaggcgctcgccgtcgatatcgagcgcaacctg
atgaagccggttaccgagatgggcctgccggtctccgtcgaaaaccggaccggcgatacg
ccgagcggtaagcgccagcgccagaagctcaatccgcccgatatcctgctgacgacgccg
gagcaggtggcgctgctgctcgccaatcgtgaggctgagcgcttcttcaaggatctgaaa
tacatcgtcctcgacgagctgcattcgctggtgacgtcgaagcgtggccacatgctctcc
cttggccttgcccgcatccgcgagctggcaccacgcgtgcagaccatcggcctttctgcc
acggtcgcagagccgatggatctgcagaaatggctggtggcgcaggaggagggggcggag
cggcatgccgggctggtgatggtcgagggtggcgccaagcctgatatttcgatccttgcg
acggacgaacgcatcccctggtccggccattccgccaaatacgccattcccgatatctat
cgtgagctgaaggagcatcggaccacgcttctcttcgtcaacacgcgctcgcaggcggaa
atgctgtttcaggagctatggtcggccaatgacgacaatctgccgatcgcgctgcatcac
ggttcgctcgatgtcggccagcgccgcaaggtcgaggccgccatggccgccaacaggctg
cgcgccgtcgtcgccacttcgacactcgatctcggtatcgactggggcgatgtcgatctc
gtcatccatgtcggcgcaccgaaaggggcgagccgccttgcccagcgcatcggccgcgcc
aatcaccgcatggacgagccgtcaaaggcgatcctcgtgcccgccaatcgtttcgaagtt
atggaatgccaggcggcgctcgacgccaattatgtcggggcgcaggatacgccgccggtt
ggcgccggtgcgcttgatgtccttgcccagcatattctcggcatggcctgcgccgaaccc
ttcgacatgctggaactctatgatgaggtccgcagcgcttcgccctatgccgatctttcc
tgggagaccttcgagcgcatcgtcgatttcgtcgccaccggcggctatgcgctcagaacc
tatgagcgctatgcccgcatccgcaagacgccggagggtcgctggcgggtctccaatcca
caggtggcgcagcaataccgactgaacctcggcaccatcgtcgaagaggcaatgctgaat
atccgcatggtgaagcgcaatgcgttgggctcgctcggtcgaggcggggcctcgctcggc
aaggtcgaggagtattttctcgaacagctttcgcccggcgatacgtttctgttctccggc
aaggtgctgcgcttcgagggtatccgtgagaatgagtgtctagcctcgcaggccttctcc
atggacccgaaaatcccgtcctatgccggcggcaagtttccgctatcgacctatcttgcc
gatcaggtgcgctcgatgatcgccgatccggatcgatggcgtcgtctgccggatcaggtg
cgcgactggctggaaatccagaaggacaagtcgatgctgccgaagcgcgacgagttgctg
atcgagacctttccgcgcggcagccgggcctacatggttgcctatcccttcgaaggacgt
ttggcacaccagacactcggcatgctgttgacgcgacggctggagcgggcaggggcaaag
ccgatgggctttgtcgccaccgattattcgcttggtatctgggggctggaggacctgggc
gtgatgatcgccaacggccatctcagcctttccgatctcttcgacgaggatatgctcggc
gacgatctcgaggcctggctcgatgaatccttcctgctgaaacgtaccttccgcaattgc
gccgtgattgccggcttgatcgagcgtcgtcatcccggcaaggaaaagaccggtcggcag
gtgacagtgtccgccgacctgatctatgacgtgctgcgcagccatgagcccgaccatatc
ctgatgcaggcgacacggcaggatgcggcgacgggacttttggatatcggccgtcttggg
gatatgctgaagcgaatcaagggccacatcacccatcgggcgctggatcacatctcgccg
cttgctgtgccggtgatgctggaaatcggcaaggtgccggtgccgggcgaggcccacgat
gtcctgctggccgaagcggcggatgatctgatccgcgaggccatggaataa

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