Rhizobium rhizogenes K84: Arad_1191
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Entry
Arad_1191 CDS
T00850
Symbol
rumA
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
ara
Rhizobium rhizogenes K84
Brite
KEGG Orthology (KO) [BR:
ara00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ara03009
]
Arad_1191 (rumA)
Enzymes [BR:
ara01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
Arad_1191 (rumA)
Ribosome biogenesis [BR:
ara03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Arad_1191 (rumA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Cons_hypoth95
MTS
Methyltransf_31
Methyltransf_15
Methyltransf_25
TRM5-TYW2_MTfase
TRAM
Motif
Other DBs
NCBI-ProteinID:
ACM25696
UniProt:
B9JAL3
LinkDB
All DBs
Position
1:complement(964252..965502)
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AA seq
416 aa
AA seq
DB search
MSTETVTIQKLGAQGDGIVQGADGPIYVPFALPGETVAIARVKSEGTLMSIASASPDRRE
PHCRHFGPDGVNGTCGGCTLQHYADAPYRAFKRQLVIDALRSKGLTPEVDDLIAAHPGER
RRVVFAARKTEKDMLIGFNQAESHHIVAIEECPIASPGIMAQLPAIRAVGAALAINAEAF
RISVLETLTGLDLAVDGIKGLSDKHRRSAIETVLALRGVGRVSLNGEVLVETTKPIIDFS
GVQISPPSGAFTQATKAAEEAMVELVATHIGKAKRIADLFAGSGTFSLRLARIGRVHAVE
SEEKALAALDHAARNTQGLKPVSIERRDLFRRPLMAQELKNYDAVIFDPPRAGAEFQTKE
LARSVVKKIVAISCNPLTLARDLAILTEAGYRITKVTPIDQFLWTSHVEVVVALEK
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccgaaaccgtcaccatccagaagctcggcgcccaaggcgacggcattgtgcaa
ggcgcggacggaccgatctacgtgcccttcgctctgcccggcgagactgtcgccattgct
cgagtgaagagcgaaggcacgctgatgtcgattgcgtcggcttcgcccgaccgccgggag
ccgcactgtcggcacttcggcccggatggggtcaacggcacctgcggcggctgtacgctg
caacactatgccgatgcgccctaccgcgccttcaaacgccagctggtgatcgacgcgctg
cgttccaaggggctgacgcccgaggtcgacgacctcattgcagcccaccccggtgagcgc
cggcgtgtcgtctttgccgcgcgcaagaccgagaaggacatgctgatcggcttcaatcag
gccgaaagccaccacatcgtcgccatcgaagaatgtcccatcgcgtcgcccggcatcatg
gcgcaacttccggcgatcagggctgtcggcgcggcgcttgccatcaatgccgaggcattc
cgcatctccgtgctcgaaacgctcaccggcctcgatctggccgtcgatggtatcaagggc
ctctccgacaagcaccggcgcagcgccatcgagaccgtacttgcccttcgcggcgttggc
cgtgtttcgctgaatggcgaagtcctggtcgaaacgacgaagccgataattgatttcagc
ggcgtgcagatctcaccgccatcgggcgccttcacccaggcgacgaaggccgccgaagag
gcgatggtcgagctggtcgccacgcatatcggcaaggcaaagcgcatcgccgatctcttc
gccggtagcggcaccttctcgctgcgcctggcgcgcatcggtcgcgtccacgccgtcgaa
agcgaggaaaaggccctggcagccctcgaccacgctgcccgcaacacgcaagggctgaag
ccggtctcgatcgaacgccgcgatctctttcgccggccgctgatggcgcaggagttgaag
aactacgacgccgtcatcttcgacccaccccgcgccggtgcggagttccagaccaaggaa
ctggctcgctccgtcgtcaaaaaaattgtcgccatctcctgcaatccgctgacactggcg
cgcgacctcgccatcctgacggaggccggctatcggatcacgaaggtaaccccgatcgac
cagtttctctggacctcgcatgtcgaggtggtggtggcactggagaagtga
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