Rhizobium rhizogenes K84: Arad_12408
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Entry
Arad_12408 CDS
T00850
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
ara
Rhizobium rhizogenes K84
Pathway
ara02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ara00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Arad_12408
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ara02000
]
Arad_12408
Transporters [BR:
ara02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Arad_12408
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Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
ACM31383
UniProt:
B9JQG4
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All DBs
Position
pAtK84c:complement(308508..310130)
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AA seq
540 aa
AA seq
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MTELSRRNLIKLAGASLPLLYLGSGGHALAESHNDTLRYITGGAFNTLDPIGVGASADSV
VLGASIYDRLVRFDRAPTDNKGSYVFDYNNIRGELAERYDVSQDGLTYTFHLRSEATFHD
GRPVTAEDVKWSLDRAVVANVTGRAQLQTGSLTDPKQFSVVDPLTFQIKLEKADRLVLPN
LASMFAPIYNSKLVRENVPADQPWGEAWLQNNTAGGGAYKVQSYKQGQQLVLVRHDGWKS
STLPAFPRVIIQTIPEAATRANLISRGDADITLNLLPETFATLRKNEAVKTIAEPMPGGI
AYLIFNTKQAPFDDVRVRKAISLAVPYDVLFAIGASGQGAPLFGAKWEKEPDTADYPQAL
PWRTDVEEAKRQLAAAGYPNGFTTKLHYNTNKAAFAASPAALLQEALAKVGITIEIEPLP
DAQWAEATSNKRLPLMIDRSFSMFPAADYFFRIFFLGGQRWNLSQWDNAEVSEILPKARF
ETDPEKYAAYAKRLISLVYQEAPAILLWRPTQEVVTAASIGGFTTWFHNLVDPRDLARTS
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagttgagcaggagaaatctcatcaaactagcaggagcatcattgccgcttcta
tatctgggcagcggcggccatgcccttgcggaatcccacaacgataccctgcggtacatc
accggcggcgcattcaacacactcgacccaataggcgtcggcgcgtcggcggattcggtg
gtgcttggagcgagcatatatgaccggcttgtccgtttcgatcgtgccccgaccgacaac
aagggcagctatgtattcgactacaacaatattcgcggtgagctggcggagcgctacgat
gtgagccaggatggcttgacgtatacattccacttgcggtccgaagcgaccttccatgat
ggccggccggtgaccgcggaagatgtgaagtggtccctcgaccgtgcagtcgttgccaac
gtcacaggccgcgcgcagctgcaaaccggttcgcttacggatcccaagcagttctctgtc
gtcgatccattgacattccaaatcaaactggaaaaagcggaccggttggtgttgccgaat
ttggcgtcgatgttcgcgccgatctacaattcgaaactcgttcgtgaaaacgttccggct
gatcagccttggggcgaagcttggcttcaaaacaataccgccggcggcggggcctacaaa
gtccagagctacaagcagggccaacaactggttctggtacggcacgatggttggaagagc
agcacgttgccggcctttcccagggtcatcatccagacgattccggaggccgcgacacgc
gccaacctgatttcgcgtggtgatgccgatatcacgctgaacctgctgcctgaaaccttt
gcgaccttacgaaaaaacgaggcggtcaagacgattgccgagcctatgccaggcggtatc
gcttatcttatcttcaataccaagcaggccccttttgatgatgtgagagtgcgcaaggcg
atctctctggcggtgccgtacgacgttctctttgccatcggcgcatccggtcaaggcgca
ccgctattcggcgccaagtgggaaaaggagccggatacggccgattatccacaggccctg
ccgtggaggactgacgtggaggaagccaagcgccagctggccgcggccggttatccgaac
ggcttcaccaccaagcttcactacaataccaacaaggcggcttttgccgcttcgccagcc
gcgctcctgcaggaagctctggccaaggtcggcattaccattgaaatcgagccgcttccg
gacgcgcaatgggctgaggccaccagcaacaagcgcttgccgctgatgatcgaccgttcc
ttttcaatgtttccggctgcggactacttcttccgcatcttcttcctgggcggccagcgt
tggaacctgtcgcaatgggacaatgcggaggtttcagagatcttgcccaaggcccgcttc
gaaaccgatccggagaaatatgcagcttacgcaaagaggctgatcagcctcgtgtaccaa
gaggcgcccgcgatcttgctttggcggcctacccaggaagtggtcactgccgcgtccatt
ggggggttcaccacatggttccacaatttggtggatccgcgcgaccttgcgcggacgagt
tga
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