Rhizobium rhizogenes K84: Arad_14133
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Entry
Arad_14133 CDS
T00850
Symbol
accR
Name
(GenBank) transcriptional repressor
KO
K20271
DeoR family transcriptional regulator, repressor of opine catabolism and conjugal transfer
Organism
ara
Rhizobium rhizogenes K84
Pathway
ara02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ara00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Arad_14133 (accR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ara03000
]
Arad_14133 (accR)
Transcription factors [BR:
ara03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
Arad_14133 (accR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
HTH_11
HTH_20
GntR
HTH_IclR
MarR_2
MarR
RepL
DUF2250
DprA_WH
HTH_5
HTH_36
Motif
Other DBs
NCBI-ProteinID:
ACM31004
UniProt:
B9JPD5
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All DBs
Position
pAtK84b:complement(91213..91986)
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AA seq
257 aa
AA seq
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MMTQAEDRQAKIMDMVRAQNFVAIRTLMDRFDISVATVRRDLGELEGAGLLRRTHGGAVS
INQVALDAGNAARLVWKHAEKVTIAAAVAGMVVDGDTVLLDSGTTALEVARALVGRNNLT
FISNGLDIVAELTRVEGQTLYSVGGEYFEANRSFGGPLAEQFIRQFNVDKLILNAASIDV
DRGLVCTSTPVNASIARAMIEVSRRVIVVADHSKFTKSSMSVTAKIEDIGVIVTDAGAKS
IIEAAPEKLRKKFVIAS
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
ttgatgacacaggccgaagatcgccaggcgaagatcatggacatggtacgagcgcaaaat
ttcgtcgccatccgcacgctgatggaccgcttcgatatctccgtcgcaaccgttcgtcgc
gacctgggagaactcgaaggcgccggacttttgcgcaggacgcatggtggcgcggtcagt
atcaaccaggttgcgctggatgcggggaacgcggcccggctcgtgtggaagcacgcagag
aaggtcacaatcgctgctgccgtagctggaatggtggtcgacggcgacacagtgctcctt
gattccggcacgacggcgctggaagtggcgcgtgcgttggtcggacgcaacaacctcacc
ttcatttcaaacggcctcgacatcgtggcggaattgacccgggtcgaggggcagacctta
tattcggtcggtggggaatattttgaggcgaaccgctcgtttggtggcccgctagccgag
cagttcattcgccagttcaacgtcgacaagctcatcctcaacgccgcgtccatcgatgtg
gatcgcggactggtctgcacctcgacgccggtcaacgcgagtatcgcccgtgccatgatc
gaagtttctcgccgggtgatcgtcgtggcggaccactccaagtttacaaagtccagcatg
tcggtcaccgcaaagatcgaggacatcggtgtcatcgtgacagacgccggcgctaagtcc
atcatcgaagcggctccggaaaaactgcggaagaagttcgtcatcgcgagctga
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