Rhizobium rhizogenes K84: Arad_1819
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Entry
Arad_1819 CDS
T00850
Symbol
ddlA
Name
(GenBank) D-alanine-D-alanine ligase protein
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
ara
Rhizobium rhizogenes K84
Pathway
ara00470
D-Amino acid metabolism
ara00550
Peptidoglycan biosynthesis
ara01100
Metabolic pathways
ara01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
ara00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Arad_1819 (ddlA)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Arad_1819 (ddlA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Arad_1819 (ddlA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ara01011
]
Arad_1819 (ddlA)
Enzymes [BR:
ara01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
Arad_1819 (ddlA)
Peptidoglycan biosynthesis and degradation proteins [BR:
ara01011
]
Precursor biosynthesis
Amino acid ligase
Arad_1819 (ddlA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
CPSase_L_D2
RimK
ATP-grasp_3
ATP-grasp_4
GARS_A
Motif
Other DBs
NCBI-ProteinID:
ACM26160
UniProt:
B9JD23
LinkDB
All DBs
Position
1:1436749..1437816
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AA seq
355 aa
AA seq
DB search
MTSRLRVAVLFGGQSSEHDVSLMSARNVIKAIDVDKYEIVPIVIRRDGQWLLTALEGGAL
PDPVVYAGSEVCLLPGGKGRILAVGDPTGPRELPAIDILFPVLHGLYGEDGSIQGLARMV
GVPLVGCGILGSATAIDKDIAKRLLRDAGLPVARSITVRPGDTLSFEEAASALGSPVFVK
PVRQGSSVGVSKAANAEEFRAALIEAFKHDDKVLIEEFVKAREIECAVLEQTDGTLFVSL
PGEIVTGQDHSFYTYDAKYIDEDGAITSVPAQLPADLTQHLRELSLDAFRALGCEGLARV
DFFVRPDMSMVVNEVNTMPGFTNISMYPKAMEATGISYPALVDRLIEHGLARGGR
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgacctcaagattgcgcgtagcggtcctcttcggcggacagtcctctgaacacgatgtt
tccctcatgtccgcccgcaacgtcattaaagcaatcgatgtcgacaaatacgagatcgtg
ccgattgtcatccgccgcgatggacagtggctgctgaccgctttggaagggggagcgctg
ccggacccggtcgtttatgcggggagcgaagtttgcctgctgccgggtggtaagggccgg
attctcgctgtcggcgacccgaccggaccgcgcgagctgccggcgatagacatcctgttc
ccggttctgcacggtctctatggcgaggatggctccatccagggcctcgcccgaatggtc
ggcgttccgttggtcggctgcggcatcctgggatcggcaaccgccatcgacaaggatatc
gccaagcgcctgctgcgcgacgccggcctgccggtcgcccgttcgatcaccgtgagacct
ggcgatactctatcgtttgaggaggcagcgagtgccttgggctcgcccgttttcgtcaag
ccggtgcgacagggctcttccgtcggcgtcagcaaggcggcgaacgccgaggaatttcgc
gcggcgctcatcgaggcgttcaagcatgacgacaaggtgctcatagaagagttcgtcaag
gcgcgcgaaatcgaatgcgccgtcctggagcagaccgatggcacgctgttcgtttccctg
cccggcgagatcgtcaccggccaggaccacagcttctatacctatgacgcaaagtatatc
gatgaggatggcgccataaccagcgttccggcacaattgcctgccgatctcacccagcat
ctccgcgagctctcgctggacgcgtttcgcgcattgggctgcgaaggtctcgcgcgcgtc
gatttcttcgtgaggccggacatgagcatggtggtgaacgaggtcaatacgatgccgggc
ttcaccaatatcagcatgtacccgaaggccatggaagcgacggggatttcctatccggcg
ctcgtcgaccggctaatcgaacacgggcttgcaagaggcggtcgatag
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