Rhizobium rhizogenes K84: Arad_2115
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Entry
Arad_2115 CDS
T00850
Symbol
xthA2
Name
(GenBank) exodeoxyribonuclease III protein
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
ara
Rhizobium rhizogenes K84
Pathway
ara03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ara00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Arad_2115 (xthA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ara03400
]
Arad_2115 (xthA2)
Enzymes [BR:
ara01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
Arad_2115 (xthA2)
DNA repair and recombination proteins [BR:
ara03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Arad_2115 (xthA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
ACM26381
UniProt:
B9JEG0
LinkDB
All DBs
Position
1:complement(1667801..1668592)
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AA seq
263 aa
AA seq
DB search
MKIATWNINGVKARIENLCQWLKDSDPDIACLQEIKTVDEGFPRLEIEALGYHVETHGQK
GFNGVAILSKAKPDEVTRGLPGDDSDEQARFIEAVFSVPDHGALRVCCLYLPNGNPVDTE
KYPYKLAWMERLRKFAADRLALEEPIILAGDYNVIPEPHDCFDPKVWENDALFLPQTRQA
FRQLENLGFTDAVRTTTDAVKLYSFWDYQAGAWPKNNGIRIDHLMLSPEAADRLTSTAIE
KHMRAWEKPSDHVPVIAHLDFQN
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcgccacctggaacatcaacggcgtcaaagcgcgtatcgaaaacctctgccag
tggctgaaggactccgatcccgatatcgcctgcctgcaggaaatcaagacggtcgatgaa
ggctttccgcgcctggagatcgaggcgctcggctatcacgtcgagacgcacgggcagaag
ggtttcaacggcgtggcgatcctctccaaagcgaagcccgacgaagtgacacgcggcctt
cccggcgacgacagcgacgaacaggcccgcttcatcgaagcggtgttctccgtgccggac
catggcgcactgcgtgtctgctgcctttacctgccgaacggcaatcccgtcgacactgaa
aaatatccctacaagcttgcctggatggagcgcctgcggaaattcgcggccgacaggctc
gctctggaagagccgatcattcttgccggcgactataatgtcatccccgagccgcatgac
tgcttcgatccgaaggtctgggaaaatgacgcgctgttcctgccgcagacccgtcaggca
ttccgtcagctcgaaaatctcggcttcaccgatgcggtgcgcaccacgacggacgcggtc
aaattatattcgttctgggattatcaggccggcgcctggccgaagaacaacggcatccgc
atcgaccatttgatgctgtcaccggaggcggccgatcgcctgacttccacggctatcgag
aaacatatgcgcgcctgggaaaagccgtcagaccacgttccagtcatcgcgcatctcgat
tttcagaattag
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