Rhizobium rhizogenes K84: Arad_2172
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Entry
Arad_2172 CDS
T00850
Name
(GenBank) ABC transporter, substrate binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
ara
Rhizobium rhizogenes K84
Pathway
ara02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ara00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Arad_2172
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ara02000
]
Arad_2172
Transporters [BR:
ara02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
Arad_2172
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
Motif
Other DBs
NCBI-ProteinID:
ACM26424
UniProt:
B9JEK3
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All DBs
Position
1:1716759..1717802
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AA seq
347 aa
AA seq
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MMKDFQMTRRGFGFLAAGAAVSAMLPLSARAAGGGAVAATFPGSWEDAYRTVLTPMVQKA
GYDLTIAPALAQDQLAKVMASPGNPPYDTLLMSPGQMAVAIENDLIQKIDPSKLKNWGML
DPSFQGEYGPTVTIEVNGIAYNPDLVPKPKGYRDLFENPAYSGKVSWTGFASNTAVMAYT
EIAKIFGSGPDDMDAVFKLFKDHPEHLKGVVDSTNHQMTLFQQGEIAVFMCSTGNVARLK
SLGLNAEFAHPETGSPAAPVNIHLTKGTANLDAAYAYMDAAISKAAQDQLKELPTEMFPT
NKDVALTTGIEAYVTRDQIKTMVYPDWVAINKHRPDWIRQFDALVAG
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaagattttcagatgacccgtcgtggcttcggctttctggccgccggcgctgcc
gtatcagccatgcttcctctttccgcgcgcgctgcgggtggcggggcggttgcagccacg
ttcccaggcagttgggaggacgcttaccggaccgtcctcactccgatggtgcagaaggct
ggctacgatctcacgatcgcaccggccctcgcgcaggaccagctcgcaaaggtgatggcg
agccccggcaacccgccctatgacacgctgctgatgtcgccgggccagatggccgtcgcc
atcgagaacgatctgatccagaaaatcgatccgagcaagctcaagaactggggaatgctt
gatccgtcgtttcagggcgaatatgggccgaccgtgaccatcgaggtcaacggcatcgcc
tataaccccgatctcgttccgaagccgaagggctatcgcgatctcttcgagaacccggcc
tatagtggcaaggtatcgtggacaggctttgcctcgaacacggcggtcatggcctatacc
gaaatcgccaagatctttggttccggtcccgacgacatggatgccgtcttcaagctgttc
aaggatcatccggagcatctgaagggcgtcgtcgacagcaccaatcatcagatgacgcta
ttccagcagggcgaaatcgccgtcttcatgtgctcgaccggcaatgttgcccgcctcaag
agccttggtctcaacgccgaatttgcccacccggaaaccggatcgccggcagctccggtc
aacatccatctgaccaagggcacagccaatcttgatgcggcatacgcctatatggatgcc
gccatctccaaagcagcccaggatcagcttaaggagctaccgacggagatgttcccgacg
aacaaggacgtcgcgctaacgaccggcattgaagcctatgtcacccgcgatcagatcaag
acgatggtctatccggactgggtcgcgatcaacaagcaccgtcccgactggattcgccag
ttcgacgcgctggtggctggttga
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