KEGG   Rhizobium rhizogenes K84: Arad_2251
Entry
Arad_2251         CDS       T00850                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoamide dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
ara  Rhizobium rhizogenes K84
Pathway
ara00010  Glycolysis / Gluconeogenesis
ara00020  Citrate cycle (TCA cycle)
ara00260  Glycine, serine and threonine metabolism
ara00280  Valine, leucine and isoleucine degradation
ara00310  Lysine degradation
ara00380  Tryptophan metabolism
ara00620  Pyruvate metabolism
ara00630  Glyoxylate and dicarboxylate metabolism
ara00640  Propanoate metabolism
ara00670  One carbon pool by folate
ara00785  Lipoic acid metabolism
ara01100  Metabolic pathways
ara01110  Biosynthesis of secondary metabolites
ara01120  Microbial metabolism in diverse environments
ara01200  Carbon metabolism
ara01210  2-Oxocarboxylic acid metabolism
ara01240  Biosynthesis of cofactors
Module
ara_M00009  Citrate cycle (TCA cycle, Krebs cycle)
ara_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ara_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
ara_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:ara00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    Arad_2251 (lpdA)
   00020 Citrate cycle (TCA cycle)
    Arad_2251 (lpdA)
   00620 Pyruvate metabolism
    Arad_2251 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    Arad_2251 (lpdA)
   00640 Propanoate metabolism
    Arad_2251 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    Arad_2251 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    Arad_2251 (lpdA)
   00310 Lysine degradation
    Arad_2251 (lpdA)
   00380 Tryptophan metabolism
    Arad_2251 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    Arad_2251 (lpdA)
   00670 One carbon pool by folate
    Arad_2251 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ara04147]
    Arad_2251 (lpdA)
Enzymes [BR:ara01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     Arad_2251 (lpdA)
Exosome [BR:ara04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   Arad_2251 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_binding_3 FAD_binding_2 FAD_oxidored NAD_binding_8 HI0933_like GIDA 2-Hacid_dh_C Thi4 AlaDh_PNT_C Lys_Orn_oxgnase Amino_oxidase DAO 3HCDH_N XdhC_C
Other DBs
NCBI-ProteinID: ACM26484
UniProt: B9JEZ3
LinkDB
Position
1:1778783..1780228
AA seq 481 aa
MAENYDVIIIGSGPGGYVAAVRAGQLGLKTAIVEREHLGGICLNWGCIPTKALLRSAEIL
DHSNHLKDYGLVLEGKVSADVKAVVARSRGVSARLNQGIGYLMKKNKVDVIWGEAKITKP
GEIVVGKSTKPVVEPQHPLPKNVKGEGTYTAKHIIVATGARPRALPGIEPDGKLIWTYFE
ALKPDVLPKSLLVMGSGAIGIEFASFYRSMGVDVTVVEVMPTIMPVEDAEISGIARKQLE
KRGLKIFTKAKVTKVEKGANNITAHVETEDGKVQQIVADRMISAVGVQGNIENLGLEALG
VKTDRGCVVIDGYGKTNVAGIYAIGDVAGPPMLAHKAEHEGVVCIEKIAGLPNVHPTDKS
KVPGCTYCNPQVASVGLTEAKAKEQGRDIRVGRFSFVANGKAIALGEDQGMVKVIFDKKT
GELLGAHMVGAEVTELIQGFVVAMNLETTEEELMHTIFPHPTVSESMKEAVLDAYGRVLN
A
NT seq 1446 nt   +upstreamnt  +downstreamnt
atggctgagaattacgacgtcatcatcatcggttccggtccaggcggctatgtcgccgcc
gtgcgcgccggtcagcttggcctgaagacggcgatcgtcgaacgcgagcacctgggcggc
atctgcctgaactggggctgcatcccgaccaaggcgctgctccgctcggccgaaattctc
gatcattccaaccatctgaaggattatggccttgttcttgagggcaaggtcagcgctgat
gtgaaggcggttgtcgcccgctcgcgcggggtgtccgcccgcctcaatcagggcatcggc
tatctgatgaagaagaacaaagtcgacgtgatctggggcgaagccaagatcaccaagccc
ggcgaaatcgtcgtcggcaagtcgaccaagccggtcgtcgagccgcagcatccgctgccg
aagaacgtcaagggcgagggtacctacaccgccaagcacatcatcgtcgccaccggtgca
cgtccgcgcgctctgcccggcatcgagccggatggcaagctgatctggacctatttcgaa
gcgctgaagccggacgtcctgccgaagtcgctgctggtcatgggctcgggcgccatcggt
attgagttcgcgagcttctatcgctccatgggcgtcgacgtcaccgtcgtcgaagtcatg
ccgaccatcatgccggtcgaagacgccgaaatctccggcatcgcccgcaagcagctcgaa
aagcgcggcctgaagatcttcaccaaggccaaggtcaccaaggtcgagaagggtgcgaac
aacatcaccgcccatgtcgagaccgaagacggcaaggtgcagcagatcgttgccgaccgc
atgatctccgccgttggcgtgcagggcaacatcgagaatctgggccttgaagcgctcggc
gtgaagaccgatcgcggctgcgttgttatcgacggctatggcaagaccaatgtagcgggc
atctatgcaatcggcgacgtcgccggcccgccgatgctggcgcacaaggccgagcatgaa
ggtgttgtctgcatcgagaagatcgccggcctgccgaacgtgcatccgaccgacaagagc
aaggtgccgggctgcacctattgcaatccgcaggtcgcctccgtcggcctgacggaagcc
aaggccaaggagcagggccgcgatatccgcgttggccgtttctccttcgtcgccaacggc
aaggcgatcgcgctcggcgaagatcagggcatggtcaaggtcatcttcgacaagaagacc
ggtgagctgctgggcgcccacatggtcggcgctgaagtcaccgaactgatccagggcttt
gtcgtcgccatgaacctggagacgacggaagaagaactgatgcacacgatcttcccgcat
ccgaccgtttcggaatcgatgaaggaagccgtgctggacgcctatggccgcgtactgaac
gcttga

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