Rhizobium rhizogenes K84: Arad_3047
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Entry
Arad_3047 CDS
T00850
Name
(GenBank) ABC transporter
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
ara
Rhizobium rhizogenes K84
Pathway
ara02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ara00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Arad_3047
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ara02000
]
Arad_3047
Transporters [BR:
ara02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
Arad_3047
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_6
SBP_bac_1
SBP_bac_11
PGM_PMM_I
Motif
Other DBs
NCBI-ProteinID:
ACM27089
UniProt:
B9JH92
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All DBs
Position
1:2426003..2427106
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AA seq
367 aa
AA seq
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MITKIHRLLTLSTAMIMASTAIAAAEPSADLIAAAKKEGTLTTIALPHNWCGYGDLIAAF
KAKYGIEVNELNPDAGSGDEVEAIRANKGNTGPQAPDVIDVGLSFGPSAKKDGLIQPYKV
STWDSIPDSAKDADGYWYGDYYGVLSFVVNKDIVKNPPKDWADLLKPEYANTVSLAGDPR
TSNQAVQAAYAAGLAAGEKDATKIGEAGLKYFAQLNKAGNFVPVIGKSASLAQGATPIVV
AWDYNGLAWRDSLNGNPPVEVTVPASGVVAGVYVQAISAFAPHPNAAKLWMEFLYSDEGQ
VGWLKGYCHPIRFNDLAKNGKIPKELLDKLPPAAAYEKAIFPTLDEQAAGKTAITTNWDS
VVGSNVQ
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
gtgatcacgaaaattcatcgtcttctgacgctctccaccgcgatgatcatggcttcgacc
gccatcgcggctgctgaaccgagcgcggaccttatcgctgccgccaagaaggaaggcacg
ctgaccaccatcgccctgccccacaactggtgcggttatggcgaccttatcgcagccttc
aaggcgaagtatggcatcgaggtcaacgaactcaatccggacgccggctcgggtgatgaa
gtcgaagccatccgcgccaacaagggcaacaccggcccgcaggctcccgacgtgatcgac
gtcggtctctcctttggtccctccgccaagaaagacggcctgatccagccttataaggtc
tcgacctgggattccattcctgacagcgccaaggatgccgacggctactggtacggcgat
tattacggcgttctctccttcgtcgtgaacaaggacatcgtcaagaacccgccgaaggac
tgggctgacctgctgaagccggaatatgccaacacggtatcgctcgctggcgacccgcgc
acgtccaaccaggccgtccaagccgcttacgctgccggtctcgccgctggcgaaaaggat
gcgaccaagatcggcgaagccggcctgaagtatttcgctcagctcaacaaggctggcaac
ttcgttccggtcatcggcaagtccgcttcgctcgctcagggtgctaccccgatcgtcgtt
gcatgggactataacggcctcgcatggcgcgacagcctgaacggcaacccaccggttgaa
gtcaccgttccggcttcgggcgttgtcgccggcgtctacgtgcaggcgatctcggctttc
gctccgcacccgaacgccgccaagctctggatggaattcctttattccgacgaaggccag
gttggctggctgaagggctattgccacccgatccgcttcaacgatcttgccaagaacggc
aagattccgaaggaactcctcgacaagttgccgccggctgccgcctatgaaaaggccatc
ttcccgacgctcgacgaacaggctgctggcaagaccgctatcaccaccaattgggacagc
gtcgtcggttcgaacgtacagtaa
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