Rhizobium rhizogenes K84: Arad_4200
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Entry
Arad_4200 CDS
T00850
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase protein
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
ara
Rhizobium rhizogenes K84
Pathway
ara00300
Lysine biosynthesis
ara00470
D-Amino acid metabolism
ara01100
Metabolic pathways
ara01110
Biosynthesis of secondary metabolites
ara01120
Microbial metabolism in diverse environments
ara01230
Biosynthesis of amino acids
Module
ara_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ara00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Arad_4200 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Arad_4200 (lysA)
Enzymes [BR:
ara01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
Arad_4200 (lysA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
ACM27953
UniProt:
B9JBQ7
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All DBs
Position
1:3349363..3350634
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AA seq
423 aa
AA seq
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MNHFQYRDGILYAEDVPVPEIAKAVGTPFYVYSTATLERHYRVFSEAFSDVDAMVCYAMK
ANSNQAVLKTLGRLGAGVDVVSVGELQRALAAGIPANRIMFSGVGKTAQEMDVALEAGIY
CFNVESEPELEVLNQRAVRAGKIAPVSFRINPDVDARTHAKISTGKKENKFGISWERART
VYARAANLPGIDATGIDMHIGSQITELQPFEDAFKLLRELVETLRGDGHDIHHVDIGGGL
GIPYRDDNTPPPLPDAYAHIVKDQLRGLNCKIVTEPGRLIVGNAGILVTEVIYVKDGGNK
SFVIVDAAMNDLIRPTLYEAYHEIRPVEITAANAPRIKADIVGPVCETGDYLALDREMAM
PKPGDLLAVSSGGAYGAVQAGTYNSRLLVPEVLVKGSDFHVIRARRTYEELIGLDSIPAW
LSA
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
gtgaaccatttccagtaccgcgacggcattctctacgcggaggacgttcccgttcccgaa
atcgccaaggcggtcggaacgcccttctacgtctattcgacggcaacgctcgagcggcac
taccgcgtcttttccgaagccttcagcgatgtcgacgccatggtctgctacgcgatgaag
gccaattccaaccaggcggtgctgaagacgcttggccgtctcggcgccggtgtcgacgtc
gtctccgtcggcgagctgcagcgcgcccttgccgccggcatcccggcaaaccgcatcatg
ttctccggcgtcggcaaaaccgcgcaggaaatggatgtcgcgctcgaagccggcatctat
tgcttcaacgtcgaatccgagccggaactggaagtgctgaaccagcgcgccgtccgcgcc
ggcaagatcgcccctgtctccttccgcatcaatcccgacgtcgatgcccgtacccatgcg
aagatttcgaccggcaagaaggaaaacaagttcggcatatcctgggaacgcgcccgcacc
gtttatgcccgcgccgccaatctgccgggtatcgacgccaccggcatcgacatgcatatc
ggcagccagatcaccgagctgcagcccttcgaggatgccttcaagctgctgcgcgaactc
gtcgagacgctgcgcggcgacggccatgacatccaccatgtcgatatcggcggtggcctc
ggcattccctatcgcgacgacaataccccgccgccgctgcccgacgcctatgcccatatc
gtcaaggatcagctgcgcggcctgaactgcaagatcgtcaccgagcccggccgcctcatt
gtcggcaatgccggcatcctggtgacggaagtcatctatgtgaaggacggcggcaacaag
agcttcgtcatcgtcgacgccgccatgaacgacctgatccgcccgacgctctacgaggcc
tatcacgagatccgccccgtcgagatcaccgcggccaatgcaccgcgcatcaaggccgat
atcgtcggcccggtctgcgaaaccggcgattatctggcgctcgatcgcgaaatggcgatg
ccgaagcccggcgatctcctggccgtcagctccggcggcgcttatggcgcggtccaggcc
ggcacctataacagccggcttctggtgcccgaagtgctggtcaagggcagcgatttccac
gtcattcgtgcgcgccggacctatgaagagctgatcggcctcgattcgattcccgcctgg
ctcagcgcataa
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