KEGG   Rhizobium rhizogenes K84: Arad_7135
Entry
Arad_7135         CDS       T00850                                 
Symbol
appD
Name
(GenBank) oligopeptide ABC transporter
  KO
K02031  peptide/nickel transport system ATP-binding protein
Organism
ara  Rhizobium rhizogenes K84
Pathway
ara02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:ara00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Arad_7135 (appD)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:ara02000]
    Arad_7135 (appD)
Transporters [BR:ara02000]
 ABC transporters, prokaryotic type
  Peptide and nickel transporters
   Peptides/nickel transporter
    Arad_7135 (appD)
SSDB
Motif
Pfam: ABC_tran oligo_HPY AAA_21 AAA_22 AAA_16 SMC_N DUF87 ABC_ATPase AAA_29 AAA_7 nSTAND_NTPase5 NACHT
Other DBs
NCBI-ProteinID: ACM28703
UniProt: B9JLY9
LinkDB
Position
2:complement(133887..134855)
AA seq 322 aa
MTDAQPMIDIRNLSVTFNRGRKPVKAVNGVSLSVRPGEVVALLGESGSGKSVTMRSLLRL
HPPGTIIEGSMTVAGRNVTALSKKELGDLRGPIVSMVFQEPRLALDPVYTLGQQIEETIR
RHENVSRQEASARALALFQKVRIPSPERRLKNYPHEMSGGMLQRSMIAMALSCNPKVLLA
DEPTTALDATVQIQILLLIRELQAEYGLSVIFVTHDIGVAAEVADRIAVMYAGRIVEEGT
ASDIINQPKHPYTRGLLGARVELAHGRDRLVTIPGSPPDLANMPPGCAFAPRCSQVSDAC
RSRVPDLVGQGGTGQVACLQYA
NT seq 969 nt   +upstreamnt  +downstreamnt
atgactgatgcccagccaatgatcgatatcagaaacctctcggtgaccttcaatcgcgga
cgcaagcccgtcaaggcggtgaacggtgtcagcctttccgtgcggccgggcgaagtcgtt
gccctgctcggcgagtccggctccggcaagagcgtgacgatgcgttccctgctgcggctg
catccgcctggaacgatcatcgaaggttcgatgacggttgccggtcgcaatgtgacagct
ctttcgaagaaggagctgggcgatctgcgcgggccgatcgtctcgatggtctttcaggaa
ccgcggcttgccctcgaccccgtctatacgctcggccagcagatcgaagagacgatccgg
cggcatgaaaatgtgtcgcgtcaagaagcctcggcgcgggcactcgccttgtttcagaaa
gttcgcatcccctcgcccgaacggcgcctcaagaattatccgcacgagatgtccggcgga
atgctgcagcgttcgatgatcgcgatggcgctttcctgcaatccaaaagtgctccttgcc
gacgagccgacgacggccctcgacgcgacggtgcaaattcagattctcctcctgatccgg
gagcttcaggcggaatatggcttgtcggtgatcttcgttacacatgacatcggcgtcgcc
gcggaagtcgccgacaggattgcggtgatgtatgccgggcggatcgtcgaggaaggcaca
gcctccgatatcatcaaccaaccgaagcatccctatacccggggcttgctgggagcccgc
gtcgagctggcccatggccgggacagattggtgacaattccgggctcaccacctgatctg
gcgaacatgccacctggctgcgcctttgcgcctcgctgctcacaggtgtcggatgcgtgc
cggtcccgcgtgcccgatctcgtcggccaaggcggaaccggacaggtggcctgccttcaa
tacgcgtga

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