Rhizobium rhizogenes K84: Arad_7362
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Entry
Arad_7362 CDS
T00850
Symbol
potD
Name
(GenBank) spermidine/putrescine ABC transporter
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
ara
Rhizobium rhizogenes K84
Pathway
ara02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ara00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Arad_7362 (potD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ara02000
]
Arad_7362 (potD)
Transporters [BR:
ara02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
Arad_7362 (potD)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_1
SBP_bac_11
Rho_GDI
Motif
Other DBs
NCBI-ProteinID:
ACM28882
UniProt:
B9JMV1
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All DBs
Position
2:complement(323691..324740)
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AA seq
349 aa
AA seq
DB search
MSIRLVPAIIFTALLSTTAHAQSSDVSGEITLTAYSGIFQDKYNEAVIKPFLAKYPNVKV
NYFPSPASSAMLGNLRSQAGDPQMDVVIFDVSTSLIGDKEGLLAPLSKTDVPSLADLVPQ
AIVKEGYGPAVTFDNLVVIYNIEAFPTAPTSLQVLWDKTYAGKMAVTSMPSILGSGLMVM
TSAMLGEDYTKSVKQSAAKLAEMAPGVQTFDPKPDAYTLVINGTDVLGTGWNARGQYYAD
ESKGKLGVMLPKEGTILQINTINLVQGSKNPVAAKAFIDYALSPEAQAAFTEVMFYAPVN
AKAKVSEAATARTVAGKLDKTLPLDWGWAATKSDEWNQIWKRQIISAGK
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgagtatccgtcttgttcctgccatcatctttactgcgctgctctctaccaccgcacac
gcgcaatcctccgatgtctcgggcgagatcacgctcaccgcttattccggaatctttcag
gacaagtacaacgaagcggtcatcaaacccttcctggcaaagtaccccaacgtgaaggtg
aactatttcccttcccccgcctcgtcggcgatgctgggcaaccttcgctcgcaggccggc
gatccgcagatggacgtggtgattttcgacgtctccacctcgctgatcggcgacaaggaa
ggcttgctcgcgccgctgagcaagactgatgtaccgagccttgctgatctggtgccgcag
gcgatcgtcaaggaaggttatggcccggcggtaaccttcgacaacctcgtcgtgatctac
aacatcgaagcctttccaaccgcaccgacctctctccaagttctctgggacaagacgtac
gccggcaagatggccgtgacttcgatgccctccatcctcggctcgggcctgatggtgatg
acctcggccatgctgggagaagactataccaagtccgtcaagcaatccgccgccaagctt
gccgagatggcaccgggggtccagaccttcgacccgaaacctgacgcctataccctggtc
atcaatggcaccgacgtgctgggcaccggctggaatgcgcgcggccagtattatgccgat
gaatccaagggcaaactgggggtcatgctgccaaaggaaggcaccatcctgcagatcaat
accatcaatctcgtgcagggctccaagaacccggtcgctgccaaggccttcatcgactat
gcgctgtctcccgaggcccaggccgcgttcacggaagtgatgttctacgcaccggtgaat
gccaaggccaaggtcagtgaagcagccacggcccgcactgtggcaggcaagctcgacaag
acactgccactcgactggggctgggctgcgacaaaatcggatgagtggaaccagatctgg
aagcgccagatcatctcggccggcaagtaa
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