Rhizobium rhizogenes K84: Arad_7517
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Entry
Arad_7517 CDS
T00850
Name
(GenBank) spermidine/putrescine ABC transporter
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
ara
Rhizobium rhizogenes K84
Pathway
ara02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ara00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Arad_7517
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ara02000
]
Arad_7517
Transporters [BR:
ara02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
Arad_7517
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
Ribosomal_L12_N
Motif
Other DBs
NCBI-ProteinID:
ACM28996
UniProt:
B9JN65
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All DBs
Position
2:442892..444112
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AA seq
406 aa
AA seq
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MNKHQSPAKATSAPALHLAGRPKLRILGTAISLLEELRIRAQDDLGIEVTFDNNDFLTTQ
YKAAKEPETYDIYDQCFHNLDIVWHWRAIQPVDTKRIVLWDEINDLTKTGHIGPNPRLGL
GDVPARKLYVQPNLALGDTPSRFISMLPTTHNFDSFAYRTDLVDNAVAMHSWGALFDERW
AGRVALVDEPAIGIFDAALAAQAAGLMSFDDIGNMSITEIDQLIDLLEERKKAGFFRGFW
QTAEDAARLMMAGDTAVQSMWSPGIGILNSKGVPVEQAVPAEGYRAWHGGLCLSKSLSGR
LLDVAYDYLNWWLSGWPGAVVARQGYYISTPQRSRQYMTSSEWDYWYEGLAAAEDLPGPD
GLTRIKAGSVRSGGSYWQRANCIAVWNTTMDEHNYLVRRWMQLVGR
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagcatcagtctccggcaaaggccacttccgcacccgcgctgcatctggccggc
cggccgaaattgcgcattctcgggacagccatttcgctgctcgaggaactgcgcattcgg
gctcaggacgatctcggcatcgaggtaacattcgacaacaatgatttcctcaccacccag
tacaaggcggcgaaggagcccgagacctacgacatctatgatcagtgcttccacaatctc
gatatcgtctggcattggcgcgcgatccagccggtcgatacgaagcgcatcgtcctgtgg
gacgagatcaacgatctgaccaagaccggccatatcggccccaacccgcggctggggctc
ggcgatgtgccggcgcgcaagctgtatgtgcagccgaacctggcgctcggcgacacgccc
tcccgtttcatctccatgctgccgaccacccataatttcgacagtttcgcctaccgaact
gacctcgtggacaatgccgtcgccatgcattcctggggcgcgcttttcgatgagcgatgg
gcgggccgggtcgctctggtggacgaaccggccatcggcattttcgatgccgcattggcc
gcgcaggccgccggcctgatgtccttcgacgatatcggcaacatgtcgattacggaaatc
gaccagttgatcgacctattggaagagcggaagaaggcgggcttcttccgtggcttctgg
cagacggcggaggatgcggcccgcctgatgatggctggtgataccgcagttcaaagcatg
tggtcgccgggcatcggcatattgaattccaagggcgttccggtcgaacaggcggtgccg
gcggagggttatcgcgcctggcacggtggtctatgcctttcgaagagcctgagtgggcgc
ctgcttgatgtcgcctatgattatctgaactggtggctctcgggctggccgggggcggtc
gttgcccgccagggctattatatctccaccccgcagcgctcccgccagtacatgacgtcg
tcggaatgggattactggtatgagggtcttgccgccgccgaagatctgcccggccctgat
ggtctgacgcggataaaggcgggctcggtcagaagcggcggatcctattggcagcgtgcc
aattgcattgcggtctggaataccactatggatgagcacaattatctcgtccgccgatgg
atgcagctcgtcggtcgataa
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