Rhizobium rhizogenes K84: Arad_9771
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Entry
Arad_9771 CDS
T00850
Symbol
appF
Name
(GenBank) oligopeptide ABC transporter
KO
K02032
peptide/nickel transport system ATP-binding protein
Organism
ara
Rhizobium rhizogenes K84
Pathway
ara02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ara00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Arad_9771 (appF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ara02000
]
Arad_9771 (appF)
Transporters [BR:
ara02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Arad_9771 (appF)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
AAA_16
AAA_19
AAA_30
NB-ARC
AAA_22
SMC_N
AAA_29
MeaB
PRK
AAA
TsaE
nSTAND3
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
ACM30744
UniProt:
B9JLK8
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All DBs
Position
2:2417450..2418406
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AA seq
318 aa
AA seq
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MNEPLLSVRNLAKHYTTRGTKTSVLQDISFEIGRGEVVGLVGESGSGKTTIGRSVLRLIE
PSAGSIRFDGIALTTLSASAMRRIRPRMQYIFQDPFASLSPRMTIGEILTEGLTIQGIGT
SKEQLDRAQSALEQVDLPADAIHRYVHEFSGGQRQRIGIARALTLAPDFLVADEPVSALD
VSIQAQVINLLRDLQQRLGLTMLFISHDLAVVEYICDRIIVLYLGRIMEIAPSSELYVSP
QHPYTRALLSAIPSPDPDARCDRQILKGDIPSPANPPSGCVFRTRCPNALPACANAVPKL
REISPGHFKACFRDDLSD
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgaacgagcccctgctctccgttcgcaatctcgcgaagcactatacgacccgcggcacg
aagacctccgtcctgcaggatatctccttcgagatcggcaggggcgaagtggtcggcctc
gtcggcgaatccggcagcggcaagacgacgatcggccggtcggtcctgcgcctcatcgaa
ccctcggcaggcagcatccgtttcgacggcatcgccctaaccaccctctcagcatcggcg
atgcggcggattcggccgcgcatgcaatacattttccaggacccgttcgcgagcctctcg
ccccgcatgacgatcggcgaaatcctcaccgagggcctgacgatccagggtatcggcact
tcgaaggagcagctagatcgtgctcaaagcgcgctcgagcaagtggatctgccggccgat
gccatccatcgctacgtccatgaattttccggcggccagcgccagcgcattggcattgcg
agggcactcaccctcgcgccggatttcctggtggccgacgagccggtatcagccctcgac
gtgtcgatccaggcgcaggtcatcaacctcttgcgcgatctgcagcagcgcctcggcctc
accatgctcttcatctcgcatgatctcgccgtggtcgaatatatctgcgaccggatcatc
gtgctctatctcggacgcatcatggagatcgcgccgagcagcgagctctatgtctcgccg
cagcacccctatacgcgagccctgctttcggcgatcccctcgcccgatccggatgcgcgg
tgtgaccggcagatcctcaagggcgatattccaagccccgccaacccgcccagcggctgc
gtcttccgcacccgctgtcccaatgcgctgccggcctgcgccaacgccgtgccgaagctg
cgggaaatctcgcccggtcatttcaaggcctgcttccgcgacgatctctccgattga
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