Ascochyta rabiei: EKO05_0000177
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Entry
EKO05_0000177 CDS
T09445
Name
(RefSeq) sister chromatid cohesion protein 1
KO
K06670
cohesin complex subunit SCC1
Organism
arab
Ascochyta rabiei
Pathway
arab04111
Cell cycle - yeast
Brite
KEGG Orthology (KO) [BR:
arab00001
]
09140 Cellular Processes
09143 Cell growth and death
04111 Cell cycle - yeast
EKO05_0000177
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
arab03036
]
EKO05_0000177
Chromosome and associated proteins [BR:
arab03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
EKO05_0000177
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad21_Rec8_N
Rad21_Rec8
Motif
Other DBs
NCBI-GeneID:
62209714
NCBI-ProteinID:
XP_038802716
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Position
1:join(696475..696747,696794..698419)
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AA seq
632 aa
AA seq
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MFLPEDLLFKSGQLARVWLAANQHKKLTKAQVLQDKIDEDIQVIIRPEGAAGGPLALRLN
GQLLLGVVRIYHRKAHYLHDDCNDALWKIKMAFRPGNIDLPAQTHVANPTSLTLPDMITD
LDLLAPMPDPALLLSQTLDGDLAFGNTTLSDWDASQFLSHSVEQPRQPEMELDDEDQLRL
DIGEDFEPLHLPFDEGTSIEVARRESLQRPREEEFGTELKDLRDDMEFQVDTGEDMTDLA
HGTELNLGLDTEMGGMAGTELPLPLPSSVAGDDVPQLTREDSPLSELGEEEATRLAQEVA
EQDPTVFEPEQEEESIHQARAKRRKVITQDAETMISTAQLRDQQTNRDKILKQASFLPRD
PLLMALLNMQRSGGFVSSILGDGRSQGWAPELRGILSLELVSRPSKRKRDNAIAGLEQTE
GEAAVEVEKTPQLEIEQDEPTLGVDDFNLGGDPTIVEDDEIIHLPSDIGARPVEEEEDEA
FSPIPDNFDDTTVPLYHPAESGPISLGTKHAVHLLREQFGPDAEESESMRQKNTIVFQEL
LPEAQTSRADATKMFFEVLVLATKDAIKVEQPGTALGGPLRIRAKRGLWGQWAETAASGE
LASQSQAAAQTTAVDAPAESILAGPAEVSVSA
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgtttcttcccgaggacctcctcttcaagtcgggccagcttgcccgcgtctggctcgcc
gccaaccagcacaagaagctcaccaaggcccaagtcttgcaggacaagatcgatgaagac
atccaggtcatcatccggcccgagggcgctgctggtggcccgctggcattgcgcttgaac
ggccagctgctgctcggtgtcgtgcgcatctaccacaggaaggcgcactacctgcacgac
gactgcaacgacgcgttgtggaagatcaagatggctttccgcccgggaaacatcgacctg
cccgcgcagacacacgtcgctaaccctacaagtctgacactgcccgacatgatcacggat
cttgacctgctcgcgcccatgcccgacccagccttgctcctgtcgcagacgctcgacgga
gaccttgcctttggaaacaccaccctgtcagattgggacgccagccagtttctgtctcac
agtgtcgagcaaccacgccagcccgagatggaactggacgacgaggaccagctcaggctc
gacattggcgaagacttcgagcctctccacctaccgttcgacgaaggcaccagcatcgaa
gtcgcacgtcgcgaatcccttcagcgacccagggaggaagagttcggcacagagctaaag
gacctgcgcgacgacatggaattccaggtggacactggcgaagacatgaccgacctggca
cacggcacggaactcaatctcggtctagacaccgaaatgggtggtatggccggcacggaa
ttgccactccccctgccatcttccgtggctggagatgacgtgccacaacttactcgcgaa
gactcgccgttatccgagcttggcgaggaggaagctactcgccttgcccaagaagttgcc
gagcaagatcccaccgtgttcgagcctgagcaggaggaagaatcgatccaccaggccagg
gccaagcgcagaaaggtcatcacccaggatgccgaaaccatgatctcgaccgcccagctc
agggatcagcaaacgaatcgtgacaagatcctgaagcaggcgtcgttcctaccgcgcgac
ccgctcttgatggcactgcttaacatgcagaggtccggtggctttgtttctagcattctg
ggcgacggccgaagtcaaggctgggctcctgaattgagaggcattctttcgttggagctt
gtttcgcgtcctagcaagcgcaagcgcgacaacgccattgcaggtcttgaacagactgaa
ggcgaagccgctgtcgaggtggagaagacgccgcagcttgagatcgaacaggacgagccg
acattgggggtggatgacttcaacctcggcggcgatcctacaatcgttgaagacgacgag
atcatccacctccctagcgatatcggcgcgcgaccagtcgaggaagaggaagacgaggcc
ttctctcccatccccgacaactttgacgacacaaccgtcccgctgtaccacccagctgag
agcggccccatctcgctaggcaccaagcatgccgttcacctcctgcgggaacagtttggc
ccggatgcagaggagagcgaatcgatgcgacagaagaacacaatcgtcttccaggagctg
cttcccgaggcccagacatcacgagccgacgctaccaagatgttcttcgaagtcttggtt
ctcgccacaaaggatgcaatcaaggtcgagcagccaggcaccgcgctgggaggaccgctc
cgcattcgcgcaaagcgtggcctctgggggcagtgggccgagacggctgctagcggtgag
ctggcctcgcaaagccaggctgctgcgcagacaacagcagtcgatgcacctgcggagagc
attcttgctggcccggctgaggtttctgtttccgcgtaa
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