Ascochyta rabiei: EKO05_0000240
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Entry
EKO05_0000240 CDS
T09445
Name
(RefSeq) uncharacterized protein
KO
K14411
RNA-binding protein Musashi
Organism
arab
Ascochyta rabiei
Pathway
arab03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
arab00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
EKO05_0000240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arab03019
]
EKO05_0000240
Messenger RNA biogenesis [BR:
arab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
EKO05_0000240
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
RRM_11
TMEM156
Motif
Other DBs
NCBI-GeneID:
62209778
NCBI-ProteinID:
XP_038802780
LinkDB
All DBs
Position
1:complement(join(869699..870820,870870..871033,871116..871152))
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AA seq
440 aa
AA seq
DB search
MFIGGLNWETTEDSLKGYFTQFGEVSECTVMRDSATGRSRGFGFLTFKDPKCVNTVMVKE
HYLDGKIIDPKRAIPREEQERTSKIFVGGVSQEATEEDFTNFFKQFGRVVDATLMMDKET
GRPRGFGFVTFDGDAAVDATLKQPLQILGKPIEVKRAQPRGNMRDGEDDKKFGRNNKFGN
RDGGNNGNSGYDNQNQQQQGGTAGMTPAMMAQYWQRMQQYFQQMQQQLAAGGGGMPNAMG
MGGMNPMQMQQMQNMQQMMGGGMNRGNGSPNPQNMGGGMNPMQMQQMQQMQQMQQQQMMQ
QGGSFGGGSEQGMMGGGPRPAYTAQEQLAFEQQKYEQQQARRQQQSGGYGGQGGPTSWEG
MYDDAPQPSIPSGPGGGRGGFKHQNNNRQRQGSSQPPTGPSAAPINAPTGPKNAGKPGAN
YRGGGRTNNFRHQPYGGGRG
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgttcatcggtggcctgaactgggagacaacagaggattcccttaaaggctacttcaca
caattcggtgaggtgagcgaatgtactgttatgcgcgattcggccaccggccgctctcga
ggcttcggcttcctcactttcaaagatcccaaatgtgtcaacactgtcatggtcaaggag
cattacctcgacggcaagattatcgaccccaagagggctatccctagggaggagcaggag
cgaaccagcaagatcttcgttggtggtgtcagccaggaggcaactgaggaggactttaca
aacttctttaagcagttcggccgcgttgtcgatgccacgctcatgatggacaaagagaca
ggtcggccgcgtggttttggtttcgttacctttgacggcgatgcagcagtagatgcaaca
ctgaagcaacccctccagatccttggcaagccgatcgaggtcaagcgtgctcagccacga
ggcaacatgcgagatggcgaagatgacaagaagtttggtcgcaacaacaagttcggcaac
cgcgatggaggtaacaacggtaatagtggctacgataatcagaaccagcaacaacaaggt
ggcaccgccggcatgacacccgccatgatggctcaatactggcaacgaatgcagcagtac
ttccagcagatgcaacagcagcttgctgctggcggtggcggtatgccgaatgccatgggc
atgggaggcatgaacccgatgcagatgcagcagatgcaaaacatgcagcagatgatggga
ggaggcatgaaccgcggtaacggcagcccgaacccacagaacatgggtggcggtatgaac
ccgatgcaaatgcagcagatgcagcagatgcaacagatgcagcaacagcaaatgatgcag
caaggcggcagcttcggcggcggcagcgaacaaggtatgatgggcggtggtcctcgtcca
gcgtacacagctcaagaacaactagccttcgaacaacaaaaatacgagcaacagcaagcc
cggcgccaacagcagtcaggtgggtatggaggtcagggaggacctacaagttgggaaggc
atgtacgacgatgcccctcagccctccatcccatctggccctggtggcggccgtggtggc
ttcaagcaccaaaacaacaaccgccaacgtcaaggctcctcacagcctccgactggacct
agcgccgctcccatcaacgcgcccacgggccccaagaacgccggcaagcctggtgcgaac
tatcgcggcggtggaagaaccaacaacttccgacaccagccctacggcggcggtcgcgga
tag
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integrated database retrieval system
