Ascochyta rabiei: EKO05_0000361
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Entry
EKO05_0000361 CDS
T09445
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
arab
Ascochyta rabiei
Pathway
arab03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
arab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EKO05_0000361
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
arab03400
]
EKO05_0000361
Enzymes [BR:
arab01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
EKO05_0000361
DNA repair and recombination proteins [BR:
arab03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
EKO05_0000361
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AP_endonuc_2
GAGA_bind
Motif
Other DBs
NCBI-GeneID:
62209904
NCBI-ProteinID:
XP_059491403
LinkDB
All DBs
Position
1:complement(join(1235160..1236261,1236443..1236479,1236560..1237319))
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AA seq
632 aa
AA seq
DB search
MKLVSSRDHVLLKSFLYRSLLASTHLHAPELDLSYRVRAELRSLAHRNYYQSSRKVLAKA
QNPIGTPTVAYCSARLLQLQLPLNSSLALTSSRRHSHLHSSVASICSQVPRLYINHCARL
RPNTATASLHISTTSPAQASPPRASTMARKAAEASDSSLSPAPEDISAQLETKATVKAAT
NGKKRKAETTVKTTNNTKRSKRAPADEIKEEAVETPAKKKVTRAKKSKEPVLPLEERTMD
SKLRIGAHVSVAGGVHNAIPNLLHIGANAFAMFMKNQRKWDNPDMDPEHAALFINGCQDH
NIEVGDCCLPHGSYLVNLAHPDPERKKQAYDCFQNDLVRCEKLGIKLYNFHPGNANATTR
EEGIKLIAENLNRAHTDPATGSVITVLETMASLGNTIGGTFEDIAAIISHVEKKDRVGVC
LDTCHVFAAGYDLRTPNTYAEVMKKFDEVIGLKYLMALHVNDSKAPLASYRDLHARIGTG
YLGLRAFHNLVNDTRLHGLPMVLETPVDSVDGNGKKFEDKSIWAREIKMLEKLVGMDVET
DEFKDLEKSLHEQGNGERERIGDQVEKKKVKDAKPKAVRKKKAEGDEEVEDAEDVKPKKS
APKKAAPKKAAPKRKAAAAKKVESEEDNDDDE
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttgtttcgtctcgtgatcatgtgttgttgaagtctttcctataccgctcctta
cttgcttctacgcacctccacgctcctgaattggatttgtcgtatcgagtacgcgctgag
ctacgttcacttgctcatcgcaactactaccaaagttctcgtaaagtcttagctaaagcg
caaaatccaatcggcactcctacagtagcttattgttcagctcgattgctccaattgcag
ctcccgctcaactcgagtttggctctcacctcgtcacggcgacactctcaccttcactct
tccgtcgcctcgatttgctctcaagtgccacgcctctatataaaccactgcgcccgtctt
cgaccgaacaccgcgactgcatcgctacacatctccaccacatctcccgcccaagcgtct
ccaccacgcgcaagcacaatggcaaggaaagccgcagaagcttcggactcgtccctgtca
cccgcgcctgaggatatctcagcccaacttgagactaaagccacagtcaaggctgcgact
aacggcaagaagagaaaggcagagactaccgtcaagaccaccaataacacgaagcgcagc
aagagggccccagcagatgaaatcaaagaagaggcagttgaaacaccagccaagaagaaa
gtcacccgcgcaaagaagagcaaggagcctgtcctgccactcgaagagcgcactatggat
tccaaactgcgtatcggcgctcacgtcagtgtcgctggaggtgtgcataatgccataccg
aatctcttgcatattggtgcgaacgcgttcgccatgttcatgaagaaccaacgcaagtgg
gacaacccagacatggatcccgaacacgccgcccttttcatcaacgggtgccaggaccac
aatatcgaggtgggagattgctgcctcccgcacggctcttacctcgtcaatctcgctcac
cccgatcctgagcgcaaaaagcaagcctatgattgcttccaaaacgacctcgtccgctgc
gagaagcttggcatcaagctctacaacttccacccgggcaatgccaacgccacaacgcgc
gaggaaggcatcaaactcatcgccgagaacctaaaccgtgcccataccgaccccgccaca
ggctctgtcatcacagtcctcgaaaccatggcttctctcggcaacaccatcggcggtacc
tttgaggacatcgccgccatcatctcgcacgtggagaaaaaggaccgcgtaggcgtgtgt
ctagatacttgccacgtttttgccgctggctacgacctgcggacgccaaacacgtacgcc
gaagtgatgaagaaattcgacgaagtcataggcttgaagtatctgatggctcttcacgtc
aacgacagcaaagccccacttgccagctaccgcgacctccacgcacgcattggcactggc
tacctggggctgcgcgccttccacaacctagtcaacgatacacgtctgcatggcttgccc
atggtgctggaaacgcctgttgacagcgtcgatggaaacgggaagaaatttgaggataag
agtatctgggcgcgtgagatcaagatgttggagaagttggtaggcatggatgtcgagacc
gacgagttcaaagatctggagaagagtctgcatgagcagggcaacggggagcgggagcgg
attggtgaccaggttgagaagaagaaggtcaaggatgcgaagcccaaggctgtgaggaag
aagaaggccgagggagatgaggaagttgaggacgctgaagacgtaaagccaaaaaaatct
gcgccgaagaaggctgcgccgaagaaggctgcgccgaagagaaaggctgctgctgcgaag
aaggtcgagagcgaggaggataatgacgacgacgaatag
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