Ascochyta rabiei: EKO05_0000487
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Entry
EKO05_0000487 CDS
T09445
Name
(RefSeq) DNA-dependent ATPase protein rad54
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
arab
Ascochyta rabiei
Pathway
arab03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
arab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EKO05_0000487
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
arab03400
]
EKO05_0000487
DNA repair and recombination proteins [BR:
arab03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
EKO05_0000487
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Rad54_N
Helicase_C
ResIII
HDA2-3
Motif
Other DBs
NCBI-GeneID:
62210024
NCBI-ProteinID:
XP_038803026
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Position
1:1686089..1688500
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AA seq
803 aa
AA seq
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MGECTPAKPVVRLYGGTPHSTERLHKPFKCPGSAASTRISEKPARKRRKVDYAGADGADG
DDKPYSNDDRLALATRDINRFPVFKPKDKDTAFRARFSVPLLNKDATSYNANRPAPLLGM
RLGAVFVARPLHDPSGEFAIVLYDPTVDDKPASTEEVVPKMSQEEKKEMDTPVVHKSLAE
ILGLKKKVDEERPRVPVVIDPRLTKVLRPHQVEGVRFLYRATTGLIDPKANGCIMADEMG
LGKTLQCIALMWTLIKQSPDAGKSTIQKCVIACPSSLVRNWANELVKWLGPDAIHPFAID
GKATKEELISQIRQWSIASGRSVVRPVLIVSYETLRLYVDEFGQTPIGLLLCDEGHRLKN
GESQTFTALNGLNVQRRVILSGTPIQNDLSEYFALLNFANPNYLGTRADFRKQFEIPILR
GRDADGTDEDRKKGDERLKELLTLVNKFIIRRTNDILSKYLPVKYEHVVFCNLAPFQKDL
YNHFLQSPEIKSLLKGKGSQPLKAIGMLKKLCNHPDLLDLPMDVPGSENVLPEDFVPKDA
RGRDRDVKVWYSGKMLVLDRMLARIRAETNDKIVLISNYTQTLDIFGALCRSRGYGCLRL
DGTMNVSKRQKLVDKFNDPEGPEFVFLLSSKAGGCGLNLIGANRLVLFDPDWNPAADQQA
LARVWRDGQKKDCFVYRFMTTGTIEEKIFQRQSHKQSLSSCVVDSAEDVERHFSLDSLRE
LFMYRDNTTSDTHDTFKCKRCRKEDGRQVLKAPAMLYGDTSTWNHFVNDGESGPLGKIQD
LLLRQETAQGCNEVSAVFQYISH
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgggcgagtgtacccccgcaaagcccgtggtgcgattgtatggcggcaccccgcactcg
acagaacgcctgcacaagcccttcaaatgccccggatccgcagcgtcgacacgcatctca
gagaagcctgcccgcaagaggcgcaaggtcgactatgctggcgcggatggcgcggatggc
gacgacaagccctactctaacgacgaccgcctggcactcgccacgcgcgacatcaaccgc
ttccctgtcttcaagcccaaggacaaagacacggcattcagggcgaggttctcggttcct
ctgctgaacaaagacgcgacgtcctacaatgccaaccgccctgcgccacttttgggcatg
cgcctcggcgccgtctttgttgctcggccgctgcacgacccgagtggagagttcgccatt
gtcctctacgaccccactgttgacgacaagcctgcatccacggaagaggttgtgcccaag
atgagccaggaagagaagaaagaaatggacacgcctgtagtacacaagagccttgctgag
attcttggattgaagaaaaaggtcgacgaagaacggccaagagtgccagtcgtcatcgat
ccaagactgaccaaagttttacgcccgcatcaggttgaaggtgtccgcttcttgtaccga
gccacgacgggcttgatcgacccgaaggcgaacggatgcatcatggcggacgagatgggt
ctcggcaagacgctgcaatgtattgcactcatgtggacactgatcaagcagtcccccgac
gccggcaaatccacgattcagaagtgtgtcatcgcttgcccttcaagtctggtcagaaac
tgggcaaacgagctggtcaagtggctcggcccggatgcaatccaccccttcgctatagac
ggcaaagcaaccaaggaggagctaatctcacaaattcgacagtggtccattgcctccgga
cgttctgttgttcgacctgttctcattgtctcctacgagacacttcgcctatacgtggac
gagtttggccagactcccatcggcctactgctctgcgacgaaggtcaccgactgaagaac
ggagaaagccaaaccttcacagcgctcaacgggctgaacgtacaaagacgcgtcatcctc
tctggcactccaattcagaatgatctgtctgaatatttcgccttgttgaactttgcgaac
cccaactacctcggcacacgagcagacttccgcaagcagtttgagattcctatattgaga
ggtcgcgatgccgacggaacggacgaagaccgaaagaagggtgacgaacgcctcaaagag
cttctgacgctcgtcaacaagttcatcattcgacgtaccaacgacatcctttccaagtac
ctgcctgtcaagtacgaacatgtggtcttctgcaaccttgcgccttttcagaaggatctt
tacaaccatttcctccagtcgccggagatcaagagtctgctcaaaggcaaaggctcgcag
cctctcaaggctatcggtatgctgaagaagctctgcaaccaccccgacctactcgacctg
cccatggatgtacctggtagcgagaacgtacttccggaagactttgtacccaaggatgct
cgaggaagagaccgagatgtcaaggtctggtactctggcaagatgctagtgctcgaccgc
atgctcgcccgcattcgtgctgagacgaatgacaaaatcgtcctcatttccaactacacg
cagacgttggacatatttggtgctctctgtcgatctcgcggttacggttgtctgcgcctg
gatggcacgatgaacgtcagtaagcgtcaaaagctagtcgacaagttcaatgaccccgag
ggtcccgagtttgtcttccttttgtcgtctaaagcgggtggctgcggcctcaacctcatc
ggagcgaaccgactggtcctgtttgaccctgactggaaccccgcggctgaccagcaagcg
cttgcgcgtgtttggcgtgacggacagaagaaggactgctttgtgtaccggttcatgacg
actggcactattgaggagaagatctttcagcgacagtcgcacaagcaatcgctttcctcg
tgtgttgttgactcggccgaggatgttgagcgtcatttcagtctcgactcgttgcgcgag
ttgttcatgtacagagacaacactacgagtgacacgcacgacacgttcaaatgcaagcgt
tgcaggaaagaggacggccggcaggtgctcaaggcaccggccatgttgtatggcgatacg
agcacatggaaccactttgtcaacgacggggagtcgggaccgcttgggaagatacaggat
ctcttactcaggcaggagactgcgcagggctgtaacgaggtcagcgccgtgttccagtac
atcagtcattag
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