Ascochyta rabiei: EKO05_0000636
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Entry
EKO05_0000636 CDS
T09445
Name
(RefSeq) COPII coat Sec23p-Sfb3p heterodimer component
KO
K14007
protein transport protein SEC24
Organism
arab
Ascochyta rabiei
Pathway
arab04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
arab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
EKO05_0000636
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
arab04131
]
EKO05_0000636
Membrane trafficking [BR:
arab04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
EKO05_0000636
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
DUF1678
Motif
Other DBs
NCBI-GeneID:
84442264
NCBI-ProteinID:
XP_059491453
LinkDB
All DBs
Position
1:complement(join(2104067..2104156,2104246..2105426,2105473..2107315))
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AA seq
1037 aa
AA seq
DB search
MSDFSTRPAQAQGPPNPNAPPRTDDPTRWRPPVAASPAGYSQGGSPYTHGGSPYPQGGSP
YPHGGSPYTQGGAPQHGSPAQQQQQQQQEGYFPPQASPPSHHGDPNVNQLAAQMGGVGLG
LGGDAPPDHRRKKKDRHAYHNLEGPGGSAPAFHGLPQPATPSQYSPQVGGPQWQEPQITP
AMSQFPAATPLFTPGAVASPMQHAARAHTPQPGTAVGSAQGKVDPESIPSIPKSRDTPAK
YYLEHVYPTMEHHIPPPATVPFVAYDQGNSSPKFARLTLNNIPVSAEALAATALPLGLVL
QPLAPLQEGETPVPVLDFGETGPPRCRRCRAYINPFMQFKAGGNKLVCNMCSFPNDVPGE
YFAPTDASGARVDRLQRPELTLGTVDYLVPKEYWSKPPVGLRYLFLIDVTAESVERGFLD
TFCAGILKALYGEASDEADATESAVKISQGAKVGVITYDKEMHFYNLSPKLATAQMLVMP
DLEEPFLPFTEGLFVDPLESKTVITSLLTSLPNMFREFRHPEPALLPTLNSAVAALTATG
GKIVCSLGALPTFGPGRLFVRDDGNVHNNDAERKLLKTEHPGFTTVAKKMVENGIGCDFF
LAAPSGGYLDIATIGHVSATTGGEVFYYPNFHSPRDDLKLSKEITHTVRRETGYQALMKV
RCSNGLQVSGYHGNYFHHNFGADLEFGTIDADKAIGVLFSYDGKLDPKLDAHFQSALLYT
TASGERRVRCSNIVASISQSAGECMKFVDQDAVINIIAKEACARMTEKSLKDIRGALTEK
TVDILAGYRKNFTGNSPPGQLVLPENLKEFSMYMLGLIKSRAFKAGKEPTDRRVHDMRLI
KSMGPLELSLYLYPRVIAVHDLDPADGFANENGHLRMPSGVRASFSKVDEGGVYIVDNGQ
ICLLWIHQHVSPNLLEDLFGPEHNSLKALNPFASSLPVLDTHLNAQVRNILQYLQGSRAS
KALTLQLARQGLDGAEYEFARLLYEDRNNEAQSYVDWLVHVHRHIQLELAGQRKKNDDSD
NSNTGSQFVGLRTPYWG
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacttctcgacgcgcccggcccaggcccagggcccgccgaaccccaatgcgccg
ccgaggacagacgaccctacacgatggcgtccgcctgtcgctgcgagccccgccggctac
agccagggcggcagtccctacacccacggcggcagtccctacccccaaggcggcagtcct
tacccccacggcggcagtccctacacccaaggcggagcgccacagcatggctcgcccgcg
caacagcagcagcagcagcagcaagaaggctacttccccccccaggccagtcccccgtca
caccacggcgaccccaacgtgaaccagctggcggcgcagatgggaggcgtgggcttgggc
ttgggcggggatgcgcccccagatcacaggcgcaagaagaaggacaggcacgcgtaccac
aacctcgagggcccgggagggagtgcgccggccttccatggccttccgcagccagccacc
ccgtcgcagtacagcccgcaggtcggcggcccgcagtggcaggagccgcagatcacgccc
gccatgagccagttccccgccgccacgccgctgttcaccccgggcgccgtcgcctcccca
atgcagcacgccgctcgcgcacacacgccccagccaggcaccgctgtcggctccgcccag
ggcaaggtcgaccccgagtccatcccgagcatccccaagtcgcgagacaccccggccaag
tactacctcgagcacgtctaccccaccatggagcaccacatacccccgccagccacagtg
ccctttgtagcctacgaccagggcaactcgtcgcccaagtttgccaggctgaccctcaac
aacatccccgtctctgccgaggcgctcgccgccacagccctgccgctcggcctggtccta
cagccccttgccccgctgcaggaaggcgagacgccagtgcccgtgctggactttggcgag
accgggccgccgaggtgcaggcggtgcagagcctacatcaatccctttatgcagttcaag
gccggcggcaacaagcttgtgtgcaacatgtgcagcttccccaacgacgtgcccggcgaa
tactttgcccctaccgatgcttctggcgcgagagtcgacaggctacagcggcctgagctg
acgcttggtaccgtcgactaccttgtgcccaaggagtactggtccaagccgccagtcgga
ctgcgctacctgttcctgatcgatgtcaccgcggagagcgtcgaacgcggcttcctcgac
accttctgcgcaggcatcctgaaagcgctgtatggcgaagcgagcgacgaggccgatgcc
acagagagcgctgtcaagatctcccagggcgccaaagtcggtgtcatcacctacgacaag
gagatgcacttctacaacctcagtccaaagctcgccacagcgcaaatgctggtcatgccg
gatcttgaggagccattcctgcccttcaccgagggcttgtttgtcgaccctcttgaatca
aagaccgtcatcacctctctgcttacctcgcttcccaacatgttccgcgagttccgacac
cccgagccagctctgctgcccacgctcaactcggcggtggccgctttgaccgctaccggc
ggaaagattgtctgttccttgggcgcattgcccacatttggcccaggacgtctgttcgtg
cgagacgacggcaacgtccacaacaacgacgctgagaggaagctgctcaagacagagcac
cctggcttcacgaccgtggcaaagaaaatggtggagaacggtatcggctgtgacttcttc
ctggccgcacccagcggtggctacctcgacatcgcaaccataggccacgtatctgcgact
actggcggcgaggtcttctactaccccaacttccactcgccccgagacgacctcaaactg
tccaaggagatcacgcacaccgtgaggcgggaaaccggttatcaagcgctgatgaaggtt
cgatgctccaacggtctgcaggtctccggctaccatggcaactacttccaccacaacttt
ggagccgatctcgaattcggtaccattgatgccgacaaagcgatcggcgtgctgttcagc
tacgacggcaagctcgaccccaaactcgacgcccatttccagagcgctcttctctacact
acggcgagcggcgagcggcgcgtccgctgcagcaacatcgtcgccagcatcagtcaaagt
gcgggcgagtgcatgaagtttgttgaccaagacgccgtcatcaacatcattgccaaagaa
gcctgcgcacgcatgaccgaaaagagcctcaaggacatccgaggggcgctgacagagaag
actgtggatatcctcgctgggtacaggaagaattttaccggaaacagcccgcccggtcag
ctcgtcctccctgagaatctcaaagaattcagcatgtacatgctcggcctgatcaagtcg
cgtgccttcaaggctggcaaggagcccactgaccgtcgcgtccacgacatgcggctgatc
aagtcgatgggtcctctcgaactctccctctacctctacccccgcgtcattgcagtgcac
gacctggatcctgccgacggtttcgccaacgagaacggacatctccgcatgccctccggc
gtgcgcgcttccttctccaaagtcgatgaaggcggcgtctacattgtcgacaacgggcag
atctgcctcctctggatccaccagcacgtctctccaaacctactcgaagacctcttcggc
cccgaacacaactccctcaaagccctcaaccccttcgcctcgtccctgcccgtgctcgac
acacacctcaacgcgcaggtccgcaacatcctgcaatacctgcaaggcagccgagcctcc
aaggcgctcacccttcagctcgcacgccaaggcctcgacggcgccgaatacgagttcgcg
cgcctgctgtacgaggaccgcaacaacgaagcgcagagctacgtcgactggctggtccac
gtgcatcgccacatccagctcgagctcgccggccagcgcaagaagaacgacgacagcgat
aacagcaacaccgggagccagttcgtggggctgcgcacgccctactggggatga
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