Ascochyta rabiei: EKO05_0000829
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Entry
EKO05_0000829 CDS
T09445
Name
(RefSeq) ubiquitin ligase (cullin) of SCF
KO
K03347
cullin 1
Organism
arab
Ascochyta rabiei
Pathway
arab04111
Cell cycle - yeast
arab04120
Ubiquitin mediated proteolysis
arab04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
arab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
EKO05_0000829
04120 Ubiquitin mediated proteolysis
EKO05_0000829
09140 Cellular Processes
09143 Cell growth and death
04111 Cell cycle - yeast
EKO05_0000829
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
arab04121
]
EKO05_0000829
Ubiquitin system [BR:
arab04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Cullin
EKO05_0000829
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
DUF6092
Phage_Treg
WAC_Acf1_DNA_bd
Motif
Other DBs
NCBI-GeneID:
62210371
NCBI-ProteinID:
XP_038803373
LinkDB
All DBs
Position
1:join(2780654..2780703,2781168..2783238,2783289..2783477)
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AA seq
769 aa
AA seq
DB search
MASTMPPVPAKDDVNATWKYLEAGVDKIMTNLRGGMDMKTYMGLYTAIHNFCTAQKAVAG
SSFTTNNNRGGAHLLGEDLYQHLIEYLKAHLAGVQAQSKEHVDEALLTFYIKEWNRYTTA
GQYNNHLFRYLNRHWVKREMDEGKKHIYDIYTLHLVRWKEDMFFGTQESVMRSVLKLVEK
QRNGETIEQSHIKSVVDSFVSLGLDEADSSKSTLDVYKQYFEKPFLDATAKYYDNESKQF
LAENSVVEYMKKAEARLDEEKDRVPLYLLNEIMSPLMRTCEQSLITNHSQALREEFQILL
DHDKQEDLGRMYKLLARIPEGLDPLRSRFETHVRKAGLQAVEKLAQEGESLEPKIYVEAL
LEIHTQYQDLVNKAFNGESEFVRSLDNACREFVNRNKICKSGSNKSPELLAKYTDTLLKR
SGAKMSEEDDMEKLLTQIMTVFKYIEDKDVFQKFYSRMLAKRLVQTTSASDDAETSMISK
LKEACGFEYTNKLQRMFQDMQISKDLNGAFKEWQSNNLDETDVKASVDASYHILGTGFWP
LQPPTTPFTAPQLIVQTYERFARFYNHKHQGRKLTWLWQLCKGEVKANYCKVAGSKASPT
FQVSTYQMAIMLLFNDSDSVTYDEIAEATKLNKETLDPSLGVFIKAKVLIAQPDGAKPES
GTTYKLNTGFKTKKVKMNLNIGIKSEQKAEAEDTHKTIEEDRKLLMQSAIVRIMKSRKKM
KHQQLVSETIQQIKNRFMPRVPDIKKCIDILLEKEYLERLEDDELGYLA
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atggcttctacgatgccgcccgtccctgcaaaggacgatgtcaacgctacttggaaatat
ctagaggctggcgtcgataagatcatgaccaacctgcgagggggtatggacatgaagaca
tacatgggcctttacaccgccattcataacttctgtaccgcacagaaagccgtcgccggc
tcgtccttcactactaacaacaaccgcggcggtgcgcacctacttggagaggacctctac
caacatctgatcgaatacctcaaggcacatttggctggcgtacaagcacagtcaaaggag
catgtcgatgaggcgcttctcaccttctacatcaaggagtggaacaggtacacgactgct
gggcagtacaacaatcacttgttcagatacctgaaccgtcattgggtaaagcgcgagatg
gatgagggcaagaagcacatctacgacatctacacgctgcatttggttcggtggaaggaa
gacatgttctttggcacacaagagagcgtcatgcgctccgtcctgaagctagtcgagaag
caacgaaacggcgagaccatagaacagtcccacatcaaatcagtggtcgattcctttgtg
tcactaggtttggacgaggctgatagctcgaaatcgacgctggacgtatacaagcagtac
tttgagaagccgttcttggacgctaccgcgaaatactacgacaacgagtcgaaacaattt
ctcgccgagaacagcgttgttgagtacatgaagaaggccgaggcacgcctggacgaagag
aaggatcgcgttcccctctacctgctcaacgagatcatgtctccgttaatgcgaacgtgt
gagcagtccctgatcacgaatcactcccaagccctgcgggaggagtttcaaatccttctg
gaccacgacaaacaagaagatcttggccggatgtacaagctcctcgctcgcattcccgaa
ggtctggaccccctgcgcagccgcttcgagactcacgtccgcaaggcgggcttgcaagca
gttgagaagctagcgcaggagggtgagagcttggaacccaagatctatgttgaggctctt
ctcgagattcacactcaataccaggatcttgtcaacaaggcttttaacggcgagtctgaa
tttgtgcgttctttggacaacgcatgcagagaatttgtcaaccgcaataagatctgcaag
tctggctccaacaagtcaccggaacttctcgccaagtacaccgatactctgttgaaacga
tcgggggcgaagatgagcgaggaagacgacatggagaagttgttgactcagattatgacc
gtcttcaagtacattgaggacaaggacgtcttccagaagttctactcgcgtatgctggcg
aagcgtctcgttcagactacctctgcatccgacgacgccgagactagcatgatcagcaag
ctcaaggaggcatgcggttttgagtacaccaacaagctccagcgtatgttccaggatatg
cagatctccaaggatcttaacggagcctttaaggaatggcagtccaacaacttggacgag
actgatgtcaaggccagcgtcgatgccagctatcacattcttggtaccggtttctggccg
ctccagccgcctactacacccttcacagccccgcagttgattgttcagacctacgagcgt
tttgcacgcttctataaccacaagcaccaaggtcgtaagctcacatggctatggcaacta
tgcaagggtgaagtaaaggccaactactgcaaggtcgctggttccaaggcttctccaact
ttccaggtttctacatatcagatggccatcatgcttctcttcaacgacagtgatagcgtc
acctacgacgaaatcgcagaggctaccaagctcaacaaggagacgctcgatcctagcttg
ggtgtgttcatcaaggctaaagtcttgattgctcagccagacggtgccaagcctgaatca
ggtacaacctacaagctcaacacaggcttcaagaccaagaaggtcaagatgaacctgaac
atcggaatcaagtccgagcagaaggcggaggctgaggatacgcacaagacgattgaggag
gaccgaaagctactcatgcagtcggccattgtgcgtatcatgaagtctcgcaagaagatg
aagcatcagcagcttgtctctgagacgattcaacagatcaagaaccgattcatgccccgt
gttccagacatcaagaagtgcatagacattctactcgagaaggagtacctggagcgtctc
gaagacgacgagctcggctacctcgcgtaa
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