Ascochyta rabiei: EKO05_0001046
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Entry
EKO05_0001046 CDS
T09445
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a
KO
K02977
ubiquitin-small subunit ribosomal protein S27Ae
Organism
arab
Ascochyta rabiei
Pathway
arab03010
Ribosome
arab04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
arab00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
EKO05_0001046
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
EKO05_0001046
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
arab03011
]
EKO05_0001046
04121 Ubiquitin system [BR:
arab04121
]
EKO05_0001046
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
arab04147
]
EKO05_0001046
Ribosome [BR:
arab03011
]
Ribosomal proteins
Eukaryotes
Small subunit
EKO05_0001046
Archaea
EKO05_0001046
Ubiquitin system [BR:
arab04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
EKO05_0001046
Exosome [BR:
arab04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
EKO05_0001046
Exosomal proteins of colorectal cancer cells
EKO05_0001046
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_S27
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
DUF2604
Dsc3_N
TBK1_ULD
IBR
UBL_UBAC1
Ubiquitin_5
Plexin_RBD
Cytochrome_C7
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
62210587
NCBI-ProteinID:
XP_038801810
LinkDB
All DBs
Position
2:complement(join(214256..214626,214679..214772))
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AA seq
154 aa
AA seq
DB search
MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGGKKRKKKVYTTPKKIKHKRKKTKLAVLKYYKVDGDGKIERLRRE
CPQPECGAGVFMAAMHNRQYCGRCHLTYVFDEAK
NT seq
465 nt
NT seq
+upstream
nt +downstream
nt
atgcagattttcgtcaagaccctcacgggtaagaccatcacccttgaggtggagtcttcg
gacaccatcgacaatgtgaagtccaagatccaggacaaggagggcattcccccggaccag
cagcgtctgatcttcgccggcaagcagctcgaggatggccgcactctttccgactacaac
atccagaaggagtcgacgctccacctggtgctgcgcctgcgtggtggtggcaagaagagg
aagaagaaggtctacaccacccccaagaagatcaagcacaagcgcaagaagaccaagctc
gccgtgctcaagtactacaaggtggacggcgacggcaagatcgagcgtctccgccgcgag
tgcccccagcccgagtgcggtgctggtgtcttcatggccgccatgcacaaccgccagtac
tgcggtcgctgccacttgacctacgtcttcgacgaggccaaataa
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